Table 1 Origins of okra samples and features of the cloned betasatellites obtained
From: Diversity and phylogeography of begomovirus-associated beta satellites of okra in India
Isolate | Origin (town, state) | Betasatellite species | Symptoms [cultivar]▲ | Database accession number | Size (nt) | Features (coordinates) | βC1 coding capacity | |||
|---|---|---|---|---|---|---|---|---|---|---|
|  |  |  |  |  |  | βC1 gene | SCR | A-rich | No. of amino | Predicted molecular mass (kDa) |
OYBHU | Bhubaneswar, Orissa | CroYVMB | Yellow vein mosaic, sever upward leaf curling | GU111995 | 1344 | 576-220 | 142 | 196 | 118 | 12.98 |
EL38 | Sonipat, Haryana | OLCuB | Enation leaf curl, | GU111963 | 1352 | 553-197 | 138 | 169 | 118 | 12.98 |
EL41 | Munthal, Haryana | OLCuB | Enation leaf curl, | GU111965 | 1360 | 549-193 | 138 | 169 | 118 | 12.98 |
OY177 | Chandigarh, Punjab | OLCuB | Yellow vein mosaic, sever upward curling and leaf distortion susceptible line | GU111981 | 1360 | 549-193 | 137 | 171 | 118 | 12.98 |
OY175 | Pandarahalli, Tamil Nadu | BYVB | Enation leaf curl [US Agriseed] | GU111974 | 1344 | 669-199 | 134 | 214 | 156 | 15.95 |
OY163 | Srinivaspur, Karnataka | BYVB | Complete yellowing, petiole bending, vein thickening | GU111992 | 1372 | 603-181 | 136 | 168 | 140 | 16.52 |
OY164 | Aurangabad, Maharashtra | BYVB | Yellow vein mosaic, | GU111988 | 1385 | 602-180 | 138 | 167 | 140 | 15.40 |
OY126 | Jalgov, Maharashtra | BYVB | Leaf crinkling and yellow vein mosaic, | GU111985 | 1354 | 536-180 | 138 | 170 | 118 | 12.98 |
OY81 | Karnal, Haryana | BYVB | Leaf twisting and vein twisting [US 7109] | GU111980 | 1357 | 536-180 | 137 | 170 | 118 | 12.98 |
EL12 | Sonipat, Haryana | BYVB | Enation vein twisting downward curling, | GU111962 | 1403 | 689-180 | 138 | 170 | 169 | 17.27 |
EL39 | Mundhal, Haryana | BYVB | Mild enation | GU111964 | 1314 | 718-182 | 137 | 164 | 178 | 15.40 |
OY80A | Karnal, Haryana | BYVB | Yellow vein mosaic [Biogauri] | GU111979 | 1372 | 767-192 | 138 | 176 | 191 | 15.40 |
OY112 | Guntur, Andhra Pradesh | BYVB | Intense yellow vein mosaic | GU111969 | 1356 | 602-180 | 137 | 162 | 140 | 15.40 |
OY54 | Raichur, Karnataka | BYVB | Yellow vein mosaic and enation leaf curl | GU111966 | 1364 | 683-180 | 137 | 214 | 167 | 12.98 |
OY56 | Raichur, Karnataka | BYVB | Vein netting and twisting of veins | GU111967 | 1365 | 536-180 | 138 | 168 | 118 | 12.98 |
OY56B | Raichur, Karnataka | BYVB | Vein netting and twisting of veins | GU111968 | 1370 | 535-179 | 138 | 214 | 118 | 12.98 |
OY118 | Tirchy, Tamil Nadu | BYVB | Yellow vein mosaic | GU111970 | 1352 | 536-180@ | 137 | 168 | 118@ | 15.95 |
OY158 | Thadagan, Tamil Nadu | BYVB | Yellow vein mosaic and vein thickening, | GU111971 | 1352 | 536-180 | 138 | 168 | 118 | 15.95 |
OY174 | Pandarahalli, Tamil Nadu | BYVB | Yellow vein netting [MH10] | GU111972 | 1352 | 536-180 | 134 | 168 | 118 | 15.95 |
OYVijapura | Vijaypur (Bijapur), Karnataka | BYVB | Yellow vein mosaic | GU111973 | 1366 | 638-180 | 149 | 171 | 152 | 16.72 |
OYCO1 | Coimbator, Tamil Nadu | BYVB | Yellow vein mosaic [Arun] | GU111975 | 1373 | 536-180 | 134 | 214 | 118 | 12.98 |
OYKaivara | Kaivara, Karnataka | BYVB | Yellow vein mosaic, leaf distortion | GU111976 | 1350 | 735-181 | 139 | 168 | 184 | 16.61 |
OY165 | Aurangabad, Maharashtra | BYVB | Yellow vein mosaic | GU111977 | 1354 | 534-178 | 138 | 170 | 118 | 12.98 |
OY60 | Guntur, Andhra Pradesh | BYVB | Yellow vein mosaic | GU111982 | 1376 | 560-204 | 138 | 214 | 118 | 12.98 |
OY115 | Tirchy, Tamil Nadu | BYVB | Yellow vein mosaic [MH10] | GU111983 | 1359 | 660-187 | 140 | 166 | 157 | 16.61 |
OY121 | Jalgov, Maharashtra | BYVB | Yellow vein mosaic | GU111984 | 1358 | 652-179 | 138 | 173 | 157 | 16.61 |
OY141 | Coimbator, Tamil Nadu | BYVB | Yellow vein mosaic | GU111986 | 1381 | 602-180 | 134 | 214 | 140 | 12.98 |
OY156 | Thadagan, Tamil Nadu | BYVB | Petiole bending and yellow vein mosaic | GU111987 | 1357 | 603-181 | 134 | 171 | 140 | 15.40 |
OY171 | Dharmapuri, Tamil Nadu | BYVB, | Yellow vein mosaic [MH 10] | GU111989 | 1351 | 536-180 | 138 | 168 | 118 | 14.19 |
OYNun | Bangalore, Karnataka | BYVB | Yellow vein mosaic, petiole bending | GU111991 | 1355 | 740-180 | 136 | 168 | 186 | 16.72 |
OYSOK3 | Guntur, Andhra Pradesh | BYVB | Yellow vein mosaic and yellow specks | GU111993 | 1358 | 536-180 | 138 | 172 | 118 | 12.98 |
OY173 | Pandarahalli, Tamil Nadu | BYVB | Yellow vein netting | GU111994 | 1351 | 536-180 | 138 | 167 | 118 | 15.95 |
EL10 | Sonipat, Haryana | BYVB | Enation and downward leaf curling | GU111961 | 1354 | 602-180 | 137 | 168 | 140 | 15.40 |
OY98 | Tirupathi, Andhra Pradesh | BYVB | Yellow vein mosaic, petiole bending | GU111978 | 1352 | 536-180 | 138 | 168 | 118 | 12.98 |
OY142 | Udaipur, Rajasthan | BYVB | Yellow vein mosaic [Parbrani Kranthi] | EU081883 | 1358 | 536-180 | 192 | 182 | 118 | 12.98 |
OY168 | Dharmapuri, Tamil Nadu | BYVIB* | Upward leaf curling, vein twisting | GU111990 | 1383 | 662-204 | 134 | 181 | 152 | 16.72 |