Table 1 Information of the VZV strains analyzed in this study
From: Sequencing and characterization of Varicella-Zoster virus vaccine strain SuduVax
Strain | Accession Number | Country | Length (bp) | %G+C | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Genome | TRl | Ul | IRl | IRs | Us | TRs | Â |
Dumas | NC001348 | Netherlands | 124,884 | 88 | 104,836 | 88 | 7,320 | 5,232 | 7,320 | 46.0 |
M2DR | DQ452050 | Morocco | 124,770 | 89 | 104,719 | 89 | 7,320 | 5,232 | 7,321 | 46.0 |
CA123 | DQ457052 | USA | 124,771 | 100 | 104,698 | 98 | 7,322 | 5,232 | 7,321 | 46.0 |
SD | DQ479953 | USA | 125,087 | 88 | 104,787 | 88 | 7,446 | 5,232 | 7,446 | 46.1 |
Kel | DQ479954 | USA | 125,374 | 88 | 104,857 | 88 | 7,555 | 5,232 | 7,554 | 46.2 |
11 | DQ479955 | Canada | 125,370 | 88 | 104,906 | 88 | 7,529 | 5,232 | 7,527 | 46.2 |
22 | DQ479956 | Canada | 124,868 | 88 | 104,689 | 88 | 7,386 | 5,232 | 7,385 | 46.0 |
03-500 | DQ479957 | Canada | 125,239 | 88 | 105,299 | 88 | 7,266 | 5,232 | 7,266 | 46.1 |
36 | DQ479958 | Canada | 125,030 | 88 | 104,850 | 88 | 7,387 | 5,232 | 7,385 | 46.1 |
49 | DQ479959 | Canada | 125,041 | 88 | 104,916 | 88 | 7,358 | 5,232 | 7,359 | 46.1 |
8 | DQ479960 | Canada | 125,451 | 89 | 105,020 | 88 | 7,510 | 5,232 | 7,512 | 46.2 |
32p5 | DQ479961 | USA | 124,945 | 88 | 104,760 | 88 | 7,389 | 5,232 | 7,388 | 46.1 |
32p22 | DQ479962 | USA | 125,084 | 88 | 104,791 | 88 | 7,443 | 5,232 | 7,442 | 46.1 |
32p72 | DQ479963 | USA | 125,169 | 88 | 104,870 | 88 | 7,446 | 5,232 | 7,445 | 46.1 |
NH29_3 | DQ674250 | USA | 124,811 | 87 | 104,766 | 87 | 7,320 | 5,230 | 7,321 | 46.0 |
SVETA | EU154348 | Russia | 124,813 | 87 | 104,772 | 87 | 7,319 | 5,230 | 7,318 | 46.0 |
MSP | AY548170 | USA | 124,883 | 88 | 104,848 | 88 | 7,313 | 5,232 | 7,314 | 46.0 |
BC | AY548171 | Canada | 125,459 | 88 | 105,326 | 88 | 7,363 | 5,231 | 7,363 | 46.2 |
HJ0 | AJ871403 | Germany | 124,928 | 89 | 104,752 | 89 | 7,335 | 5,230 | 7,433 | 46.0 |
pOka | AB097933 | Japan | 125,125 | 88 | 104,798 | 88 | 7,463 | 5,225 | 7,463 | 46.1 |
vOka | AB097932 | Japan | 125,078 | 88 | 104,822 | 88 | 7,427 | 5,232 | 7,421 | 46.1 |
VarilRix | DQ008354 | Japan | 124,821 | 88 | 104,761 | 88 | 7,326 | 5,231 | 7,327 | 46.1 |
VariVax | DQ008355 | Japan | 124,815 | 88 | 104,758 | 88 | 7,324 | 5,232 | 7,325 | 46.1 |
SuduVax | This study | Korea | 124,759 | 88 | 104,799 | 88 | 7,276 | 5,232 | 7,276 | 46.1 |