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Table 2 APMV4/mallard/Belgium/15129/07 genome organization and characterization (genome size 15054 nt)

From: Identification and complete genome sequencing of paramyxoviruses in mallard ducks (Anas platyrhynchos) using random access amplification and next generation sequencing technologies

Gene

Genome position

5'UTR (nt) (incl. gene-start)

ORF(nt)

3'UTR (nt) (incl. gene-end)

Intergenic region (nt)

Deduced protein size (aa)

NP

56-1606

60

1374

117

9

457

P (V; W)*

1616-2979

46

1182

(675; 413)

136

34

393

(224; 137)

M

3014-4306

77

1113

103

16

370

F

4323-6210

71

1701

116

40

566

HN

6251-8161

78

1698

135

45

565

L

8207-15037

92

6636

103

 

2211

  1. *putative RNA editing site at position 2057-2065 (5'-AAAGGGGGG-3')