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Figure 2 | Virology Journal

Figure 2

From: Early monitoring of the human polyomavirus BK replication and sequencing analysis in a cohort of adult kidney transplant patients treated with basiliximab

Figure 2

Alignment of the WWLA1 and WWLA2 TCR sequences with BKV archetype WW strain TCR sequence. The WW TCR is shown at the top of the figure while the nucleotide sequences of the WWLA1 and WWLA2 variants, determined directly from urine and blood samples of our study group, are shown below in relation to the WW TCR (GenBank accession no. AB211371), with similar nucleotides indicates by hyphens. Blocks (P, Q, R and S) commonly used to denote archetypal TCRs [11] are indicated under the TCR sequences, while proven and putative binding sites for transcription factors are illustrated above the WW TCR sequence.

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