Table 2 Potential BoHV-4 V.test ORFs presenting conserved functional domains
From: Sequencing of bovine herpesvirus 4 v.test strain reveals important genome features
BoHV-4 ORF | Domain accession number | Functional annotation | Species distributiona |
|---|---|---|---|
ORF 3 | COG0046, TIGR01735, TIGR01736, TIGR01739, PF02769 | Phosphoribosylformylglycinamidine (FGAM) synthase; AIR synthase related protein | Eukaryota; Bacteria; Archaea; Viruses |
ORF 6 | PF00747 | ssDNA binding protein | Herpesviridae |
ORF 7 | PF01366 | Protein transporter activity | Herpesviridae |
ORF 8 | PF00606 | Surface glycoprotein | Herpesviridae |
ORF 9 | COG0417, TIGR00592, PF00136, PF03104, SM00486 | DNA polymerase type-B family | Eukaryota; Bacteria; Archaea; Viruses |
ORF 10 | PF04797 | dUTPase | Herpesviridae |
Bo4 | COG5183, SM00744 | Protein involved in mRNA turnover and stability; zinc-finger RING-variant domain | Eukaryota; Bacteria |
ORF 16 | SM00337 | BCL (B-Cell lymphoma); contains BH1, BH2 regions | Eukaryota; Bacteria; Viruses |
ORF 17 | PF00716 | Serine-type endopeptidase activity | Herpesviridae |
ORF 18 | PF03049 | UL79 family | Herpesviridae |
ORF 19 | PF01499 | Virus penetration and capsid assembly | Herpesviridae |
ORF 20 | PF01646 | UL24 family | Herpesviridae |
ORF 21 | PF00693, PF01712, PF08465 | ATP binding; thymidine kinase activity; phosphotransferase activity | Eukaryota; Bacteria; Viruses |
ORF 22 | PF02489 | Virion associated envelope glycoprotein | Herpesviridae |
ORF 23 | PF04682 | BTRF1 protein conserved region | Herpesviridae |
ORF 24 | PF03043 | UL87 family | Herpesviridae |
ORF 25 | PF03122 | Structural molecule activity | Herpesvirales |
ORF 26 | PF01802 | Structural molecule activity | Herpesvirales |
ORF 29 | PF02499, PF02500 | Probable role in DNA packaging | Herpesvirales |
ORF 30 | PF05338 | Unknown function (DUF717) | Gammaherpesvirinae |
ORF 31 | TIGR01234, PF03048 | UL92 family; L-ribulokinase | Herpesvirales; Embryophyta |
ORF 32 | PF04559 | DNA cleavage and packaging | Herpesviridae |
ORF 33 | PF03044 | Possible role in capsid maturation | Herpesviridae |
ORF 34 | PF03038 | UL95 family | Herpesviridae |
ORF 35 | PF05852 | Unknown function (DUF848) | Gammaherpesvirinae |
ORF 36 | COG0515, PF00069, SM00220 | ATP binding; protein kinase activity; Serine/threonine protein kinase | Eukaryota; Bacteria; Archaea |
ORF 37 | PF01771, PF09588 | Exonuclease activity; DNA binding | Eukaryota; Bacteria; Viruses |
ORF 38 | PF10813 | Unknown function (DUF2733) | Herpesviridae |
ORF 39 | PF01528 | Integral membrane protein | Herpesviridae |
ORF 40 | PF03324 | Helicase-primase complex associated protein | Herpesviridae |
ORF 41 | PF05774 | Helicase-primase complex components | Gammaherpesvirinae |
ORF 42 | PF01677 | UL7-like protein | Herpesviridae |
ORF 43 | PF01763 | Possible role in cleavage and packaging | Herpesviridae |
ORF 44 | COG0507, PF02689 | Helicase; ATP-dependent exoDNAse (exonuclease V) | Eukaryota; Bacteria; Viruses |
ORF 46 | COG0692, TIGR00628, TIGR03443, PF03167 | Uracil DNA glycosylase | Eukaryota; Bacteria; Archaea; Viruses |
ORF 47 | PF11108 | Glycoprotein L | Herpesviridae |
ORF 48 | PF05734 | Unknown function (DUF832) | Herpesviridae |
ORF 50 | PF03326, PF04793 | Early-intermediate transcription factors | Gammaherpesvirinae |
Bo10 | PF05459, PF05812 | Transcriptional regulator proteins | Herpesviridae |
ORF 53 | PF03554 | Highly polymorphic glycoprotein | Herpesviridae |
ORF 54 | COG0756, TIGR00576, PF00692 | dUTPase | Eukaryota; Bacteria; Archaea; Viruses |
ORF 55 | PF04533 | U44 protein | Herpesviridae |
ORF 56 | PF03121 | UL52/UL70 DNA primase | Eukaryota; dsDNA Viruses |
ORF 57 | PF04633 | BMRF2 protein | Gammaherpesvirinae |
ORF 59 | PF04929 | DNA replication accessory factor | Gammaherpesvirinae |
ORF 60 | COG0208, PF00268 | Ribonucleotide reductase | Eukaryota; Bacteria; Archaea; Viruses |
ORF 61 | COG0209, TIGR02504, TIGR02506, TIGR02510, PF00317, PF02867 | Ribonucleotide reductase | Eukaryota; Bacteria; Archaea; Viruses |
ORF 62 | PF03327 | Capsid shell protein VP19C | Herpesviridae |
ORF 63 | PF04523 | Tegument protein U30 | Herpesviridae |
ORF 64 | PF04843 | Tegument protein, N-terminal conserved region | Herpesviridae |
ORF 65 | PF06112 | Capsid protein | Gammaherpesvirinae |
ORF 66 | PF03117 | UL49 family | Herpesviridae |
ORF 67 | PF04541 | Virion protein U34 | Herpesviridae |
ORF 67.5 | PF03581 | UL33-like protein | Herpesviridae |
ORF 68 | PF01673 | Putative major envelope glycoprotein | Herpesviridae |
ORF 69 | PF02718 | UL31-like protein | Herpesviridae |
ORF 71 | PF01335, SM00031 | Death effector domain | Eukaryota; Viruses |
ORF 75 | COG0046, COG0047, TIGR01735, TIGR01736, TIGR01739, TIGR01857, PF02769 | Phosphoribosylformylglycinamidine (FGAM) synthase; AIR synthase related protein | Eukaryota; Bacteria; Archaea; Viruses |
Bo17 | PF02485 | Core-2/I-Branching enzyme | Eukaryota; Bacteria; Viruses |