Table 1 Homologous regions between NDV viral proteins and human cellular proteins.
From: The matrix (M) protein of newcastle disease virus binds to human bax through its BH3 domain
Names | Sequences | Identity % | Score (Bits) | Gap % |
|---|---|---|---|---|
AF2240-M B-cell transcription factor 4 leukemia | 27 LQDTGDGKKQI 38 LQDTGDILQQI ****** ** | 72.7 | 36.0 | 0.0 |
AF2240-M Glucagon-like 1 receptor | 297 QWDSLLSYSKCLS 213 QWDGLLSYQDSLS *** **** ** | 69.0 | 27.8 | 0.0 |
AF2240-M Cholecystokinin B receptor | 128 VFSVVQA--PRVLQ 191 VYTVVQPVGPRVLQ * *** ***** | 64.0 | 26.9 | 14.0 |
AF2240-M Fibrous sheath-interacting 2 | 150 SVNAVNHVK 1506 SVNGGNHIK *** ** * | 66.0 | 20.2 | 0.0 |
AF2240-M Spectrin beta chain, brain 4 | 46 LDSWTDS 2484 LDSWTDS ******* | 100.0 | 26.5 | 0.0 |
AF2240-M Cytochrome Oxidase | 182 WDSLASFRKSLSP 298 WDSLLSYSKCLSP **** * * *** | 69.2 | 49.0 | 0.0 |
AF2240-M RAS p21 protein activator | 4 VLQDTGDGK 449 VLNDTVDGK ** ** *** | 77.0 | 21.0 | 0.0 |
AF2240-M Bid | 80 DNPGHEL 95 DALGHEL * **** | 71.4 | 24.0 | 0.0 |
AF2240-M Bax | 298 WDSLLSY 158 WDGLLSY ** **** | 85.7 | 46.0 | 0.0 |
AF2240-L Bcl-2 | 1540 DFIEMSAKL 110 DFAEMSSQL ** *** * | 66.7 | 31.0 | 0.0 |
AF2240-L Bid | 19 NTSRSEE 147 NVSRSEE * ***** | 85.7 | 29.0 | 0.0 |
AF2240-L Bid | 86 LRTYVR 2145 LRTYLR **** * | 83.3 | 27.0 | 0.0 |
AF2240-L Bad | 451 EFEPCIEYD 6 EFEPSEQED **** * | 55.6 | 25.0 | 0.0 |
AF2240-F F-box protein FBW7 | 21 LILSCICL 8 LILSCICL ******** | 100.0 | 29.9 | 0.0 |