Skip to main content

Table 1 LC/MS/MS results of cellular proteins associating with the CSFV 3'UTR

From: HuR binding to AU-rich elements present in the 3' untranslated region of Classical swine fever virus

No

Cellular protein

Mr (kDa)

Coverage*

1

Leucine-rich PPR motif-containing protein

153.2

12%

2

RNA helicase A

142

13%

3

ATP-dependent RNA helicase A isoform 2

141.1

16%

4

Nucleolin

76.6

13%

5

ATP-dependent RNA helicase DDX3X

73.2

12%

6

hnRNP Q

69.6

7%

7

ATP-dependent RNA helicase DDX5X

69.1

6%

8

RNA binding protein 47

64

6%

9

Far upstream element binding protein 3

61.6

7%

10

60 kDa heat shock protein

60.9

6%

11

hnRNP L

60.4

14%

12

RNA binding protein FUS

52.3

5%

13

Eukaryotic translation initiation factor 2

51

11%

14

Eukaryotic translation elongation factor 1A (EF1A)

50

19%

15

hnRNP H

49.2

3%

16

Lupus La protein

46.8

4%

17

hnRNP F

45.6

15%

18

NF45 protein

44.7

29%

19

DNA binding protein A

40

13%

20

hnRNP A2/B1

37.4

27%

21

Mitochondria ribosomal protein L1

36.6

10%

22

ELAV protein 1 (HuR)

36

3%

23

Y box binding protein 1

35.9

9%

24

hnRNP A1

34.2

15%

25

hnRNP D

33.4

16%

26

RNA binding protein p40 AUF1

32.6

25%

27

hnRNP A/B

30.8

16%

28

hnRNP D isoform c

29.6

21%

29

40S ribosomal protein S3

27.7

33%

30

Hspd1 protein

26.9

11%

31

GTP-binding nuclear protein Ran

25.5

23%

32

GTP-binding protein

24.4

31%

  1. * The coverage is used to indicate the percentage of the database protein sequence covered by matching peptides.