Table 2 Putative ΦCA82 ORFs and amino acid (aa) homologies with members of Microviridae
ΦCA82 ORF | No. of aa | Predicted function | Homologous protein (GenBank accession #) | % amino acid identity (homology) |
|---|---|---|---|---|
01 | 565 | major capsid protein | SpV4-VP1 (NC_003438) | 30.0 (60.0) |
Chp3-VP1 (NC_008355) | 27.0 (63.5) | |||
CPAR39-VP1 (NC_002180) | 28.0 (62.2) | |||
ΦMH2K-VP1 (NC_002643) | 26.0 (58.2) | |||
02 | 234 | minor capsid protein | Chp3-VP2 (NC_008355) | 22.0 (45.6) |
ΦMH2K-VP2 (NC_002643) | 17.9 (50.8) | |||
03 | 353 | replication initiation | SpV4-rep (NC_003438) | 22.6 (54.5) |
ΦMH2K-rep (NC_002643) | 17.0 (53.2) | |||
04 | 71 | hypothetical | ||
05 | 78 | hypothetical | ||
06 | 39 | hypothetical | ||
07 | 80 | hypothetical | ||
08 | 80 | hypothetical | ||
09 | 117 | hypothetical | ||
10 | 52 | hypothetical |