Table 5 The information of the 39 sequences used in this study
From: Compare the differences of synonymous codon usage between the two species within cardiovirus
SN | Strain | Species | Serotype | Location | Accession No. |
|---|---|---|---|---|---|
1 | BEL-2887A/91 | EMCV | EMCV | Belgium | AF356822 |
2 | BJC3 | EMCV | EMCV | China | DQ464062 |
3 | HB1 | EMCV | EMCV | China | DQ464063 |
4 | GX0601 | EMCV | EMCV | China | FJ604852 |
5 | GX0602 | EMCV | EMCV | China | FJ604853 |
6 | GXLC | EMCV | EMCV | China | FJ897755 |
7 | NJ08 | EMCV | EMCV | China | HM641897 |
8 | EMCV-CBNU | EMCV | EMCV | South Korea | DQ517424 |
9 | K3 | EMCV | EMCV | South Korea | EU780148 |
10 | K11 | EMCV | EMCV | South Korea | EU780149 |
11 | M | EMCV | EMCV | Uganda | L22089 |
12 | pEC9 | EMCV | EMCV | USA | DQ288856 |
13 | PV2 | EMCV | EMCV | Panama | X87335 |
14 | EMC-30 | EMCV | EMCV | USA | AY296731 |
15 | EMCV-D | EMCV | EMCV | Panama | M37588 |
16 | EMCV-B | EMCV | EMCV | Panama | M22457 |
17 | PV21 | EMCV | EMCV | Panama | X74312 |
18 | Rz-pMwt | EMCV | EMCV | USA | DQ294633 |
19 | DG VII(1) | ThV | TMEV | USA | X56019 |
20 | DG VII(2) | ThV | TMEV | USA | M20562 |
21 | DA | ThV | TMEV | USA | M20301 |
22 | BeAn 8386 | ThV | TMEV | Brazil | M16020 |
23 | TO4(B15) | ThV | TMEV | USA | EU718732 |
24 | TO Yale | ThV | TMEV | USA | EU723238 |
25 | Vie415HTR | ThV | TMEV | USA | EU718733 |
26 | NGS910 | ThV | TRV | Â | AB090161 |
27 | Rat theilovirus | ThV | TRV | USA | EU815052 |
28 | Rat theilovirus 2008 | ThV | TRV | USA | EU542581 |
29 | California/81 | ThV | SAFV-1 | USA | EF165067 |
30 | UC1 | ThV | SAFV-2 | Â | EU376394 |
31 | Nijmegen2007 | ThV | SAFV-3 | Netherlands | FM207487 |
32 | D/VI2273/2004 | ThV | SAFV-3 | Germany | DQ294633 |
33 | D/VI2223/2004 | ThV | SAFV-3 | Germany | EU681179 |
34 | NL1999-590 | ThV | SAFV-3 | Netherlands | HM181996 |
35 | BCH115 | ThV | SAFV-3 | China | GU943514 |
36 | NL2007-2686 | ThV | SAFV-3 | Netherlands | HM181997 |
37 | NL2007-2690 | ThV | SAFV-3 | Netherlands | HM181998 |
38 | NL2005-1035 | ThV | SAFV-3 | Netherlands | HM181999 |
39 | BCH1031 | ThV | SAFV-3 | China | GU943513 |