TY - JOUR PY - 2008 DA - 2008// TI - H5N1 Evolution Working Group. Toward a unified nomenclature system for highly pathogenic avian influenza virus (H5N1) JO - Emerg Infect Dis VL - 14 UR - https://doi.org/10.3201/eid1407.071681 DO - 10.3201/eid1407.071681 ID - ref1 ER - TY - JOUR AU - Salzberg, S. L. AU - Kingsford, C. AU - Cattoli, G. AU - Spiro, D. J. AU - Janies, D. A. AU - Aly, M. M. AU - Brown, I. H. AU - Couacy-Hymann, E. AU - De Mia, G. M. AU - Dung do, H. AU - Guercio, A. AU - Joannis, T. AU - Maken, A. A. S. AU - Osmani, A. AU - Padalino, I. AU - Saad, M. D. AU - Savić, V. AU - Sengamalay, N. A. AU - Yingst, S. AU - Zaborsky, J. AU - Zorman-Rojs, O. AU - Ghedin, E. AU - Capua, I. PY - 2007 DA - 2007// TI - Genome analysis linking recent European and African influenza (H5N1) viruses JO - Emerg Infect Dis VL - 13 UR - https://doi.org/10.3201/eid1305.070013 DO - 10.3201/eid1305.070013 ID - Salzberg2007 ER - TY - JOUR PY - 2008 DA - 2008// TI - Consultation on Clinical Aspects of Human Infection with Avian Influenza A (H5N1) Virus: Update on Avian Influenza A (H5N1) Virus Infection in Humans JO - N Engl J Med VL - 358 UR - https://doi.org/10.1056/NEJMra0707279 DO - 10.1056/NEJMra0707279 ID - ref3 ER - TY - JOUR AU - Abdel-Moneim, A. S. AU - Shany, S. A. AU - Fereidouni, S. R. AU - Eid, B. T. AU - El-Kady, M. F. AU - Starick, E. AU - Harder, T. AU - Keil, G. M. PY - 2009 DA - 2009// TI - Sequence diversity of the haemagglutinin open reading frame of recent highly pathogenic avian influenza H5N1 isolates from Egypt JO - Arch Virol VL - 154 UR - https://doi.org/10.1007/s00705-009-0461-2 DO - 10.1007/s00705-009-0461-2 ID - Abdel-Moneim2009 ER - TY - JOUR AU - Webster, R. G. AU - Bean, W. J. AU - Gorman, O. T. AU - Chambers, T. M. AU - Kawaoka, Y. PY - 1992 DA - 1992// TI - Evolution and ecology of influenza-A viruses JO - Microbiol Rev VL - 56 ID - Webster1992 ER - TY - JOUR AU - Webster, R. G. AU - Laver, W. G. AU - Air, G. M. AU - Schild, G. C. PY - 1982 DA - 1982// TI - Molecular mechanisms of variation in influenza viruses JO - Nature VL - 296 UR - https://doi.org/10.1038/296115a0 DO - 10.1038/296115a0 ID - Webster1982 ER - TY - JOUR AU - Wilson, I. A. AU - Cox, N. J. PY - 1990 DA - 1990// TI - Structural basis of immune recognition of influenza virus hemagglutinin JO - Annu Rev Immunol VL - 8 UR - https://doi.org/10.1146/annurev.iy.08.040190.003513 DO - 10.1146/annurev.iy.08.040190.003513 ID - Wilson1990 ER - TY - JOUR AU - Stӧhr, K. PY - 2002 DA - 2002// TI - Influenza-WHO cares JO - Lancet Infect Dis VL - 2 UR - https://doi.org/10.1016/S1473-3099(02)00366-3 DO - 10.1016/S1473-3099(02)00366-3 ID - Stӧhr2002 ER - TY - JOUR AU - Abdelwhab, E. M. AU - Hafez, H. M. PY - 2011 DA - 2011// TI - An overview of the epidemic of highly pathogenic H5N1 avian influenza virus in Egypt: epidemiology and control challenges JO - Epidemiol Infect VL - 139 UR - https://doi.org/10.1017/S0950268810003122 DO - 10.1017/S0950268810003122 ID - Abdelwhab2011 ER - TY - JOUR AU - Ito, T. AU - Goto, H. AU - Yamamoto, E. AU - Tanaka, H. AU - Takeuchi, M. AU - Kuwayama, M. AU - Kawaoka, Y. AU - Otsuki, K. PY - 2001 DA - 2001// TI - Generation of a highly pathogenic avian influenza A virus from an avirulent field isolate by passaging in chickens JO - J Virol VL - 75 UR - https://doi.org/10.1128/JVI.75.9.4439-4443.2001 DO - 10.1128/JVI.75.9.4439-4443.2001 ID - Ito2001 ER - TY - JOUR AU - Bragstad, K. AU - Nielsen, L. AU - Fomsgaard, A. PY - 2008 DA - 2008// TI - The evolution of human influenza A viruses from 1999 to 2006: a complete genome study JO - Virol J VL - 5 UR - https://doi.org/10.1186/1743-422X-5-40 DO - 10.1186/1743-422X-5-40 ID - Bragstad2008 ER - TY - CHAP AU - Beard, C. W. PY - 1989 DA - 1989// TI - Serological procedures BT - In American Association of Avian Pathologists PB - Kendall/Hunt Publishing Company CY - Iowa ID - Beard1989 ER - TY - JOUR AU - Abdel-Moneim, A. S. AU - Abdel-Ghany, A. E. AU - Shany, S. A. PY - 2010 DA - 2010// TI - Isolation and characterization of highly pathogenic avian influenza virus subtype H5N1 from donkeys JO - J Biomed Sci VL - 14 UR - https://doi.org/10.1186/1423-0127-17-25 DO - 10.1186/1423-0127-17-25 ID - Abdel-Moneim2010 ER - TY - JOUR AU - Kumar, S. AU - Tamura, K. AU - Jakobsen, I. B. AU - Nei, M. PY - 2001 DA - 2001// TI - Molecular evolutionary genetics analysis software JO - Bioinformatics VL - 17 UR - https://doi.org/10.1093/bioinformatics/17.12.1244 DO - 10.1093/bioinformatics/17.12.1244 ID - Kumar2001 ER - TY - CHAP AU - Gupta, R. AU - Jung, E. AU - Brunak, S. PY - 2004 DA - 2004// BT - Prediction of N-glycosylation sites in human proteins ID - Gupta2004 ER - TY - JOUR AU - Duvvuri, V. R. S. K. AU - Duvvuri, B. AU - Cuff, W. R. AU - Wu, G. E. AU - Wu, J. PY - 2009 DA - 2009// TI - Role of positive selection pressure on the evolution of H5N1 hemagglutinin JO - Genomics Proteomics and Bioinformatics VL - 7 UR - https://doi.org/10.1016/S1672-0229(08)60032-7 DO - 10.1016/S1672-0229(08)60032-7 ID - Duvvuri2009 ER - TY - STD TI - Influenza Virus Resource2004. [http://www.ncbi.nlm.nih.gov/genomes/FLU/] UR - http://www.ncbi.nlm.nih.gov/genomes/FLU/ ID - ref17 ER - TY - JOUR AU - Xu, X. AU - Subbarao, K. AU - Cox, N. J. AU - Guo, Y. PY - 1999 DA - 1999// TI - Genetic characterization of the pathogenic influenza A/Goose/Guangdong/1/96 (H5N1) virus: similarity of its hemagglutinin gene to those of H5N1 viruses from the 1997 outbreaks in Hong Kong JO - Virology VL - 261 UR - https://doi.org/10.1006/viro.1999.9820 DO - 10.1006/viro.1999.9820 ID - Xu1999 ER - TY - JOUR AU - Kaverin, N. V. AU - Rudneva, I. A. AU - Rudneva, I. A. PY - 2007 DA - 2007// TI - Epitope mapping of the hemagglutinin molecule of a highly pathogenic H5N1 influenza virus by using monoclonal antibodies JO - J Virol VL - 81 UR - https://doi.org/10.1128/JVI.01522-07 DO - 10.1128/JVI.01522-07 ID - Kaverin2007 ER - TY - JOUR AU - Li, G. AU - Tao, S. AU - Wang, X. PY - 2006 DA - 2006// TI - Sequence and epitope analysis of surface proteins of avian influenza H5N1 viruses from Asian patients JO - Chin Sci Bull VL - 51 UR - https://doi.org/10.1007/s11434-006-2140-y DO - 10.1007/s11434-006-2140-y ID - Li2006 ER - TY - JOUR AU - Veljkovic, V. AU - Veljkovic, N. AU - Muller, C. P. AU - Müller, S. AU - Glisic, S. AU - Perovic, V. AU - Kӧhler, H. PY - 2009 DA - 2009// TI - Characterization of conserved properties of hemagglutinin of H5N1 and human influenza viruses: possible consequences for therapy and infection control JO - BMC Struct Biol VL - 9 UR - https://doi.org/10.1186/1472-6807-9-21 DO - 10.1186/1472-6807-9-21 ID - Veljkovic2009 ER - TY - JOUR AU - Zhou, A. AU - Webb, G. AU - Zhu, X. AU - Steiner, D. F. PY - 1999 DA - 1999// TI - Proteolytic processing in the secretory pathway JO - J Biol Chem VL - 274 UR - https://doi.org/10.1074/jbc.274.30.20745 DO - 10.1074/jbc.274.30.20745 ID - Zhou1999 ER - TY - JOUR AU - Lycett, S. J. AU - Ward, M. J. AU - Lewis, F. I. AU - Poon, A. F. AU - Kosakovsky, P. S. L. AU - Brown, A. J. PY - 2009 DA - 2009// TI - Detection of mammalian virulence determinants in highly pathogenic avian influenza H5N1 viruses: multivariate analysis of published data JO - J Virol VL - 83 UR - https://doi.org/10.1128/JVI.00608-09 DO - 10.1128/JVI.00608-09 ID - Lycett2009 ER - TY - JOUR AU - Perdue, M. L. AU - Suarez, D. L. PY - 2000 DA - 2000// TI - Structural features of the avian influenza virus hemagglutinin that influence virulence JO - Vet Microbiol VL - 74 UR - https://doi.org/10.1016/S0378-1135(00)00168-1 DO - 10.1016/S0378-1135(00)00168-1 ID - Perdue2000 ER - TY - JOUR AU - Philpott, M. AU - Hioe, C. AU - Sheerar, M. AU - Hinshaw, V. PY - 1990 DA - 1990// TI - Hemagglutinin mutations related to attenuation altered cell tropism of a virulent avian influenza A virus JO - J Virol VL - 64 ID - Philpott1990 ER - TY - JOUR AU - Ilyushina, N. A. AU - Rudneva, I. A. AU - Gambaryan, A. S. AU - Tuzikov, A. B. AU - Bovin, N. V. PY - 2004 DA - 2004// TI - Receptor specificity of H5 influenza virus escape mutants JO - Virus Res VL - 100 UR - https://doi.org/10.1016/j.virusres.2003.12.032 DO - 10.1016/j.virusres.2003.12.032 ID - Ilyushina2004 ER - TY - JOUR AU - Nielsen, M. AU - Lundegaard, C. AU - Lund, O. AU - Kesmir, C. PY - 2005 DA - 2005// TI - The role of the proteasome in generating cytotoxic T cell epitopes: insights obtained from improved predictions of proteasomal cleavage JO - Immunogenetics VL - 57 UR - https://doi.org/10.1007/s00251-005-0781-7 DO - 10.1007/s00251-005-0781-7 ID - Nielsen2005 ER - TY - JOUR AU - Lee, C. W. AU - Senne, D. A. AU - Suarez, D. L. PY - 2004 DA - 2004// TI - Effect of vaccine use in the evolution of Mexican lineage H5N2 avian influenza virus JO - J Virol VL - 78 UR - https://doi.org/10.1128/JVI.78.15.8372-8381.2004 DO - 10.1128/JVI.78.15.8372-8381.2004 ID - Lee2004 ER - TY - JOUR AU - Ellis, J. S. AU - Zambon, M. C. PY - 2001 DA - 2001// TI - Combined PCR-heteroduplex mobility assay for detection and differentiation of influenza A viruses from different animal species JO - J Clin Microbiol VL - 39 UR - https://doi.org/10.1128/JCM.39.11.4097-4102.2001 DO - 10.1128/JCM.39.11.4097-4102.2001 ID - Ellis2001 ER - TY - JOUR AU - Gambaryan, A. AU - Tuzikov, A. AU - Pazynina, G. AU - Bovin, N. AU - Balish, A. AU - Klimov, A. PY - 2006 DA - 2006// TI - Evolution of the receptor binding phenotype of influenza A (H5) viruses JO - Virology VL - 344 UR - https://doi.org/10.1016/j.virol.2005.08.035 DO - 10.1016/j.virol.2005.08.035 ID - Gambaryan2006 ER - TY - JOUR AU - Widjaja, L. AU - Ilyushina, N. AU - Webster, R. G. AU - Webby, R. J. PY - 2006 DA - 2006// TI - Molecular changes associated with adaptation of human influenza A virus in embryonated chicken eggs JO - Virology VL - 350 UR - https://doi.org/10.1016/j.virol.2006.02.020 DO - 10.1016/j.virol.2006.02.020 ID - Widjaja2006 ER - TY - JOUR AU - Wu, W. L. AU - Chen, Y. AU - Wang, P. AU - Song, W. AU - Lau, S. Y. AU - Rayner, J. M. AU - Smith, G. J. D. AU - Webster, R. G. AU - Peiris, J. S. M. AU - Lin, T. AU - Xia, N. AU - Guan, Y. AU - Chen, H. PY - 2008 DA - 2008// TI - Antigenic profile of avian H5N1 viruses in Asia from 2002 to 2007 JO - J Virol VL - 82 UR - https://doi.org/10.1128/JVI.02256-07 DO - 10.1128/JVI.02256-07 ID - Wu2008 ER - TY - JOUR AU - Bright, R. A. AU - Ross, T. M. AU - Subbarao, K. AU - Robinson, H. L. AU - Katz, J. M. PY - 2003 DA - 2003// TI - Impact of glycosylation on the immunogenicity of a DNA-based influenza H5 HA vaccine JO - Virology VL - 308 UR - https://doi.org/10.1016/S0042-6822(03)00008-4 DO - 10.1016/S0042-6822(03)00008-4 ID - Bright2003 ER - TY - JOUR AU - Chen, H. AU - Bright, R. A. AU - Subbarao, K. AU - Smith, C. AU - Cox, N. J. AU - Katz, J. M. AU - Matsuoka, Y. PY - 2007 DA - 2007// TI - Polygenic virulence factors involved in pathogenesis of 1997 Hong Kong H5N1 influenza viruses in mice JO - Virus Res VL - 128 UR - https://doi.org/10.1016/j.virusres.2007.04.017 DO - 10.1016/j.virusres.2007.04.017 ID - Chen2007 ER -