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Table 1 List of primers used in this study (5' to 3')

From: Molecular characterization and phylogenetic analysis of small ruminant lentiviruses isolated from Canadian sheep and goats

Name

Sequence

Locationa

PCRb

CAEV F0

AACTGAAACTTCGGGGACGCCTG

305-327

1

CAEV F1

AAGGTAAGTGACTCTGCTGTACGC

334-357

1

CAEV F2

TGGTGAGTCTAGATAGAGACATGG

513-536

2

CAEV R0

GTTATCTCGTCCTAATACTTCTACTGG

2092-2118

1

CAEV R1

TTTTTCTCCTTCTACTATTCCYCC

2000-2024

1

CAEV R2

GGACGGCACCACACGTAKCCC

1820-1840

2

MVV F0

AAGTAAGGTAAGAGAGACACCTACTGG

539-566

1

MVV F1

TAGATAGAGACATGGCGAAGCAAGCTC

722-749

1

MVV F2

GACAGAAGGGAACTGTCTATGGGC

834-857

2

MVV R0

GGTGGTGCTTCTGTTACAACATAGG

2059-2083

1

MVV R1

GGACGGCACCACACGTGG

2035-2052

1

MVV R2

CCCCTCCTGYTGTTTCCCTG

2014-2034

2

  1. a Location number according to CAEV-Cork isolate [M33677] for CAEV primers and MV US 85/34 isolate [AY101611] for MVV primers
  2. b Used in first PCR (1) or second "nested" PCR (2)