Table 1 Putative interacting proteins of ToLCKeV AC3 from RNAi pathway
Peptide | Protein | Accession Number | Start | Interacting Sequence in Peptide(s) | E-value |
|---|---|---|---|---|---|
AVGGQTPIRAKI | Repressor of Silencing 1 (ROS1) | Q9SJQ6.2 | 79 | GQTPI | 517 |
NAISWFPMHLAH | Suppressor of gene silencing 3 (SGS3) | NP_197747.1 | 237 | AI SWF PMH PLLAH | 214 |
YALKHLPESTIP | Hua Enhancer 1 (HEN1) | AAL05056.1 | 704 | YALKHI RES | 20 |
AYSPISTVTQPY | (HEN4) | AAO37828.1 | 403 | AY GRPI ETMTQ | 517 |
| Â | Â | AAO37829.1 | 858 | TVTRPY | 517 |
APGYARLPSLMS | Dicer-like 1 (DCL1) | NP_171612.1 | 687 | LPSL | 7294 |
| Â | Â | Q9SP32.2 | 948 | PGTAR | 42568 |
| Â | Â | NP_171612.1 | 1329 | RLPSIM | 287 |
SMTHLYTDLWQP WHKHIPSPRASS | Dicer-like 2 (DCL2) | NP_001078101.1 NP_566199.4 | 29 | HQYTDL | 694 |
| Â | Â | Â | 246 | IPSP KRAS | 214 |
| Â | Â | Â | 1224 | HKHI | 1677 |
| Â | Â | Â | 1235 | HKHI | 1677 |
NVHIRQPLGASS | Argonaute1 (AGO1), AGO6 | AAB91987.1 | 47 | NV SVRQP | 932 |
NISSIRPTLVEV | AGO1 | NP_175274.1 | 129 | VSS-QPTL SEV | 1603 |
| Â | Â | Â | 366 | SIRPT | 517 |
| Â | Â | Â | 649 | S ARP EQVE | 54615 |
SMTHLYTDLWQP | AGO2 | NP_174413.2 | 910 | TH YYT-LW | 694 |
WHKHIPSPRASS LLHAPYDHSVSP | AGO7, Pinhead like protein, zippy | NP_177103.1 AAG60096.1 AC073178_7 | 706 | SMT HLY | 694 |
| Â | Â | Â | 148 | W NK KIP TP | 386 |
| Â | Â | Â | 14 | KHIPS | 386 |
| Â | Â | Â | 25 | LLH KPY HH HV | 214 |
| Â | Â | Â | 75 | HN SLPP PPP | 7294 |
| Â | Â | Â | 80 | PPPPP HL | 1677 |
| Â | Â | Â | 91 | PPLPP LL | 160 |
| Â | Â | Â | 98 | PLPP | 3020 |
| Â | Â | Â | 184 | YN VEISP | 137978 |
| Â | Â | Â | 293 | PLPPE | 2250 |