Table 1 Identified nucleotide contents in complete coding region (length >250 bps) in hepatitis A virus (21 isolates) genome
From: Analysis of synonymous codon usage in Hepatitis A virus
SN | A% | A3% | U% | U3% | C% | C3% | G% | G3% | (C+G)% | (C3+G3)% | aENC |
|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 29.8 | 26.9 | 32.6 | 41.9 | 15.3 | 9.5 | 22.3 | 21.7 | 37.6 | 31.2 | 39.6 |
2 | 29.9 | 27.4 | 33.0 | 43.2 | 15.2 | 9.0 | 21.9 | 20.4 | 37.1 | 29.4 | 39.2 |
3 | 30.2 | 27.7 | 32.9 | 43.4 | 15.3 | 9.2 | 21.6 | 19.6 | 36.9 | 28.8 | 39.2 |
4 | 30.0 | 27.2 | 32.9 | 43.1 | 15.3 | 9.3 | 21.8 | 20.4 | 37.1 | 29.7 | 39.0 |
5 | 30.2 | 27.9 | 32.7 | 42.1 | 15.5 | 10.0 | 21.6 | 20.0 | 37.1 | 30.0 | 38.9 |
6 | 30.1 | 27.7 | 32.9 | 42.9 | 15.2 | 9.3 | 21.8 | 20.2 | 36.9 | 29.5 | 38.8 |
7 | 30.2 | 28.0 | 32.7 | 42.1 | 15.4 | 10.0 | 21.6 | 19.9 | 37.0 | 29.9 | 38.9 |
8 | 30.3 | 28.1 | 32.7 | 42.1 | 15.5 | 10.0 | 21.5 | 19.8 | 36.9 | 29.8 | 39.0 |
9 | 30.2 | 28.0 | 32.7 | 42.1 | 15.4 | 10.0 | 21.6 | 19.9 | 37.0 | 29.9 | 38.9 |
10 | 30.1 | 27.4 | 32.9 | 42.8 | 15.2 | 9.2 | 21.8 | 20.6 | 37.0 | 29.8 | 38.9 |
11 | 29.8 | 27.0 | 32.4 | 41.9 | 15.8 | 10.3 | 22.0 | 20.7 | 37.7 | 31.0 | 40.7 |
12 | 30.3 | 27.9 | 32.8 | 42.6 | 15.3 | 9.4 | 21.6 | 20.1 | 36.9 | 29.5 | 38.8 |
13 | 29.6 | 25.8 | 32.5 | 42.7 | 16.1 | 11.0 | 21.8 | 20.5 | 37.9 | 31.5 | 40.7 |
14 | 29.8 | 26.7 | 32.7 | 43.3 | 15.9 | 10.3 | 21.5 | 19.7 | 37.4 | 30.0 | 40.0 |
15 | 30.1 | 27.5 | 32.9 | 43.3 | 15.3 | 9.1 | 21.7 | 20.2 | 37.0 | 29.3 | 39.2 |
16 | 30.0 | 27.4 | 32.7 | 42.5 | 15.6 | 10.1 | 21.7 | 20.1 | 37.3 | 30.2 | 40.0 |
17 | 30.0 | 27.3 | 32.6 | 42.6 | 15.5 | 9.6 | 21.8 | 20.4 | 37.3 | 30.0 | 39.6 |
18 | 30.1 | 27.5 | 32.7 | 42.7 | 15.4 | 9.7 | 21.7 | 20.1 | 37.1 | 29.8 | 39.5 |
19 | 30.3 | 28.0 | 32.6 | 42.0 | 15.5 | 10.0 | 21.6 | 19.9 | 37.0 | 29.9 | 38.9 |
20 | 30.1 | 27.5 | 32.9 | 42.9 | 15.2 | 9.1 | 21.8 | 20.6 | 37.0 | 29.7 | 39.1 |
21 | 30.0 | 27.4 | 32.9 | 42.8 | 15.3 | 9.2 | 21.8 | 20.6 | 37.0 | 29.8 | 39.2 |