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Table 3 Comparison of proteins from 07V63 and prototype LV

From: Characterization of a circulating PRRSV strain by means of random PCR cloning and full genome sequencing

ORF

Protein

Size 07V63

Size LV

% identity

% similarity

1a

Nsp1

385

385

85

91

 

Nsp2

833

861

81

85

 

Nsp3

447

447

93

96

 

Nsp4

203

203

92

96

 

Nsp5

170

170

96

97

 

Nsp6

16

16

100

100

 

Nsp7

269

269

96

97

 

Nsp8

45

45

100

100

1b

Nsp9

645

645

96

98

 

Nsp10

442

442

94

97

 

Nsp11

224

224

95

97

 

Nsp12

152

152

93

96

2a

GP2

249

249

93

94

2b

E

70

70

95

97

3

GP3

265

265

89

92

4

GP4

183

183

87

93

5

GP5

200

201

91

94

6

M

173

173

93

94

7

N

128

128

91

98