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Table 3 Comparison of proteins from 07V63 and prototype LV

From: Characterization of a circulating PRRSV strain by means of random PCR cloning and full genome sequencing

ORF Protein Size 07V63 Size LV % identity % similarity
1a Nsp1 385 385 85 91
  Nsp2 833 861 81 85
  Nsp3 447 447 93 96
  Nsp4 203 203 92 96
  Nsp5 170 170 96 97
  Nsp6 16 16 100 100
  Nsp7 269 269 96 97
  Nsp8 45 45 100 100
1b Nsp9 645 645 96 98
  Nsp10 442 442 94 97
  Nsp11 224 224 95 97
  Nsp12 152 152 93 96
2a GP2 249 249 93 94
2b E 70 70 95 97
3 GP3 265 265 89 92
4 GP4 183 183 87 93
5 GP5 200 201 91 94
6 M 173 173 93 94
7 N 128 128 91 98