Table 3 Sequences used for phylogenetic analyses of large terminase orthologs from 23 herpesviruses
Subfamily | Virus species | Natural host | Abbreviation | Length | GenBank Accession | |
|---|---|---|---|---|---|---|
| Â | Â | Â | Â | nta | a.a.b | Â |
unassigned | Duck enteritis virus | waterfowl | DEV | 2220 | 739 | EF524094/EF203707c |
Alphaherpesvirinae | Herpes simplex virus 1 | Human | HSV-1 | 2208 | 735 | FJ593289 |
| Â | Herpes simplex virus 2 | Human | HSV-2 | 2205 | 734 | Z86099 |
| Â | Cercopithecine herpesvirus 16 | Monkey and human | CeHV-16 | 2208 | 735 | DQ149153 |
| Â | Marek's disease virus 1 | Chicken | MDV-1 | 2214 | 737 | AF147806 |
| Â | Marek's disease virus 2 | Chicken | MDV-2 | 2247 | 748 | AB049735 |
| Â | Herpesvirus of turkey | Turkey | HVT | 2217 | 738 | AF291866 |
| Â | Varicella-zoster virus | Human | VZV | 2232 | 743 | DQ674250 |
| Â | Bovine herpesvirus 1 | Cattle | BHV-1 | 2208 | 735 | AJ004801 |
| Â | Bovine herpesvirus 5 | Cattle | BHV-5 | 2214 | 737 | AY261359 |
| Â | Pseudorabies virus | Swine | PRV | 2208 | 735 | AY189899 |
| Â | Equine herpesvirus 1 | Horse | EHV-1 | 2205 | 734 | AY665713 |
| Â | Equine herpesvirus 4 | Horse | EHV-4 | 2205 | 734 | AF030027 |
| Â | Infectious laryngotracheitis virus | Chicken | ILTV | 2295 | 764 | NC_006623 |
| Â | Psittacid herpesvirus 1 | Parrots | PsHV | 2388 | 795 | NC_005264 |
Betaherpesvirinae | Murine cytomegalovirus | Mouse | MCMV | 2013 | 670 | U68299 |
| Â | Rat cytomegalovirus | Rat | RCMV | 2013 | 670 | AF232689 |
| Â | Human herpesvirus 6 | Human | HHV-6 | 2001 | 666 | AF157706 |
Gammaherpesvirinae | Epstein-Barr virus | Human | EBV | 2073 | 690 | NC_007605 |
| Â | Rhesus lymphocryptovirus | Monkey | RhLCV | 2073 | 690 | AY037858 |
| Â | Human herpesvirus 8 | Huamn | HHV-4 | 2073 | 690 | NC_007605 |
| Â | Murid herpesvirus 4 | Mouse | MuHV-4 | 2040 | 679 | AF105037 |
| Â | Bovine herpesvirus 4 | Cattle | BoHV-4 | 2049 | 682 | NC_002665 |