The full genome sequence of three strains of Jamestown Canyon virus and their pathogenesis in mice or monkeys

Table 4 Percent amino acid identity of the JCV predicted proteins amongst the three viruses

	Percent amino acid identity (total protein length in amino acids)
Virus pair	N (235)	NSs (92)	M poly (1444)	G_N^a (286)	NS_M^b (163)	G_C^c (969)	L (2263)
JCV/61/CO-cl & JCV/03/CT-cl	97	93	94	98	91	94	97
JCV/61/CO-cl & JCV/04/CT-cl	98	92	94	99	98	94	99
JCV/03/CT-cl & JCV/04/CT-cl	97	91	96	99	91	96	97

^a For this comparison, G_N is defined as amino acids 16-301 of the M polyprotein.
^b For this comparison, NS_M is defined as amino acids 302-464 of the M polyprotein.
^c For this comparison, G_C is defined as amino acids 476-1444 of the M polyprotein.

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