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Table 1 Range of F gene nucleotide sequence similarity (%) of NDV strains within one genotype and between different genotypes

From: Entire genome sequence analysis of genotype IX Newcastle disease viruses reveals their early-genotype phylogenetic position and recent-genotype genome size

Genotype

(No. of sequences)

I

II

III

IV

V

VI

VII

VIII

IX

I(23)

>91.8

87.0-91.8

88.6-93.3

86.2-92.5

81.9-86.3

83.4-87.9

82.6-92.2

85.8-89.7

89.3-91.7

II(32)

-

>89.1

87.1-91.2

85.1-90.0

81.2-85.3

82.3-86.4

80.9-90.1

84.8-88.0

88.5-89.9

III(6)

-

-

>92.4

87.8-94.6

83.5-88.3

83.7-90.1

83.2-89.1

87.1-91.6

91.2-94.3

IV(5)

-

-

-

>92.2

83.6-89.5

84.8-91.3

84.1-89.6

86.7-92.2

88.6-92.9

V(11)

-

-

-

-

>89.2

84.4-90.9

82.7-88.5

86.7-90.8

84.4-87.4

VI(16)

-

-

-

-

-

>91.4

84.8-92.4

88.4-92.4

84.8-88.7

VII(45)

-

-

-

-

-

-

>84.6

86.3-91.2

84.8-87.7

VIII(2)

-

-

-

-

-

-

-

>93.1

87.6-90.1

IX(7)

-

-

-

-

-

-

-

-

>99.3

  1. The nucleotide sequence similarity of NDV strains were calculated by the MegAlign program in the Lasergene package (DNASTAR Inc. Madison, WI 53715, USA). 30 sequences of full-length genome together with more than one hundred sequences of complete F gene were involved.