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Table 1 Sequences of primers and probes for PCR and real time RT-PCR.

From: Influenza A viral loads in respiratory samples collected from patients infected with pandemic H1N1, seasonal H1N1 and H3N2 viruses

Primer and probe

Sequence (5'>3')

Reference

Bm-M-1

TAT TCG TCT CAG GGA GCA AAA GCA GGT AG

Hoffmann E et al.

Bm-M-1027R

ATA TCG TCT CGT ATT AGT AGA AAC AAG GTA GTT TTT

Hoffmann E et al.

FluA Forward

GAC CRA TCC TGT CAC CTC TGA C

CDC

FluA Reverse

AGG GCA TTY TGG ACA AAK CGT CTA

CDC

FluA Probe1

TGC AGT CCT CGC TCA CTG GGC ACG

CDC

RnaseP Forward

AGA TTT GGA CCT GCG AGC G

CDC

RnaseP Reverse

GAG CGG CTG TCT CCA CAA GT

CDC

RnaseP Probe1

TTC TGA CCT GAA GGC TCT GCG CG

CDC

  1. 1TaqMan® probes are labeled at the 5'-end with the reporter molecule 6-carboxyfluorescein (FAM) and with the quencher, Blackhole Quencher 1 (BHQ1) at the 3'-end.