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Figure 1 | Virology Journal

Figure 1

From: Molecular characterisation of virulence graded field isolates of myxoma virus

Figure 1

A) Sequence of the intergenic region between genes M003L and M002L. The sequence corresponds to MV Lausanne and is shown in the reverse complementary orientation. Amino acid sequences of M003 and M002 are indicated, the M003L stop (boxed) and M002L start (bold typeface) codons are also indicated. The nine tandem repeats (TR1-9) are marked and the percent homology to the canonical sequence (CTAATTCGGCTC) is shown. The sites of insertion (*) and deletions (Δ and italic typeface) are indicated. B) Sequence alignment from the M002/M003 intergenic region. Insertion and deletion mutations are shown and the relative TRs are indicated. The asterisks mark the site of the insertion of two copies of the TR (designated TR10 and TR11) in strain 87. Dashed lines represent sequences absent from particular strains. Highlighting is used to indicate degrees of homology between strains. The sequence alignment starts at nucleotide 2756 in Lu.

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