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Table 2 Conclusion of relative quantification methods of differentially expressed genes at two and four days after inoculation

From: Transient expression of βC1 protein differentially regulates host genes related to stress response, chloroplast and mitochondrial functions

DEG

Length bps

Identity

Up/Down regulation

SAA

(287)

S. lycopersicum WRKY transcription factor IId-1 splice

Upregulated

SAB

(231)

Putative Rieske iron-sulfur protein [A. thaliana]Length = 539, Rieske iron-sulfur protein Tic55 [P. sativum]Length = 553

Upregulated

SAC

(386)

N. tabacum mitochondrial DNA, complete genome Length = 430597 NADH dehydrogenase subunit 1 NADH dehydrogenase subunit 2, 846 bp at 5' side:

Down regulated

SAD

(262)

Quinonprotein alcohol dehydrogenase like M. truncatula

Upregulated

SA1

(442)

Trigger factor (chaperone in protein export)

Upregulated

SA2

(688)

A. thaliana calmodulin-binding receptor-like kinase

Upregulated

SA3

(772)

Polyribonucleotide nucleotidyltransferase

Upregulated

SA4

(283)

Chromosomal replication initiator protein DnaA

Down regulated