Table 1 Homology analysis of the three ToLCVs with other geminiviruses.

DQ629101

Tomato leaf curl virus isolate ToLCND-CTS

83/80

68/78

82/72

89/87

79/82

46/22

79/80

80/84

EU910140/

EU910141

Tomato leaf curl Kerala virus isolate ToLCV-K5/K3

97/83.5

100/64

92/69

91/87.5

99/88

93/22

97/93

100/91

DQ629102

Tomato leaf curl virus isolate ToLCND-CTM

83.5/100

64/100

69/100

87.5/100

88/100

22/100

93/100

91/100

DQ116884

Tomato leaf curl virus isolate Rahim Yaar Khan, PT7

88.5/83

82/65

92/71

91/86

88/88

89.5/22

95/94

89/88

AJ507777

Croton yellow vein mosaic virus

85/88

55.5/64

72/86

88/97

92/89

43/57

81/82

85/89

U38239

Tomato leaf curl virus - Bangalore II

87/87

67/65

81/71

93/87

91/91

46/27

94/96

92/96

AY297924

Tomato leaf curl virus -

82/81

63/77

78/68

95/88

92/89

42/21

79/81

86/89

DQ852623

Tomato leaf curl virus - [Kerala II 2005]

79.5/78

39/47

79.5/69

84/80

86/87

41/23

88.5/89

73/71

EU862323

Tomato leaf curl virus

81/75

51/57

80/66

66/63

67/63

87/24

82/80

83/80

AJ496286

Cotton leaf curl Kokhran virus

85.5/82

83/55

83/71

90/85

85/85

62/32

94/95

91/96

AY765254

Cotton leaf curl Rajasthan virus

81/75

71/45

81/67

67/66

70/70

62/32

92/92

72/71

AM712436

Pedilanthus leaf curl virus

86/81

81/55

91/71

91/86

88/88

80/31

94/94

84/86

DQ116881

Pepper leaf curl virus

79.5/85

57/79

71.5/85

86.5/84

79/75

42/51

94.5/94

87/85

DQ989326

Papaya leaf curl virus

81/81

58/58

82.5/74

86.5/84

79/73

50,24

93/94

87/84

EU482411

Bhendi yellow vein mosaic virus

83/71

64/58

74/67

61/61

68/67

44/15

93/92

74/73

EF175733

Radish leaf curl virus

87/82

58/61

91/72

85/82

85/85

84/24

95/95

91/95

FJ487911

Euphorbia leaf curl virus-

83/81

55/71

92/74

91/83

86/83

48/27

91/91

75/78

AJ810157

Stachytarpheta leaf curl virus - [Hn34]

81/73

81/73

89/67

70/65

66/61

84/30

82/80

76/74