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Table 1 Homology analysis of the three ToLCVs with other geminiviruses.

From: Molecular characterization of two distinct monopartite begomoviruses infecting tomato in india

Accession Virus species/virus isolates Identity- species IR - nt AC1-aa AC2-aa AC3-aa AC4-aa AV1-aa AV2-aa
DQ629101 Tomato leaf curl virus isolate ToLCND-CTS 83/80 68/78 82/72 89/87 79/82 46/22 79/80 80/84
EU910140/
EU910141
Tomato leaf curl Kerala virus isolate ToLCV-K5/K3 97/83.5 100/64 92/69 91/87.5 99/88 93/22 97/93 100/91
DQ629102 Tomato leaf curl virus isolate ToLCND-CTM 83.5/100 64/100 69/100 87.5/100 88/100 22/100 93/100 91/100
DQ116884 Tomato leaf curl virus isolate Rahim Yaar Khan, PT7 88.5/83 82/65 92/71 91/86 88/88 89.5/22 95/94 89/88
AJ507777 Croton yellow vein mosaic virus 85/88 55.5/64 72/86 88/97 92/89 43/57 81/82 85/89
U38239 Tomato leaf curl virus - Bangalore II 87/87 67/65 81/71 93/87 91/91 46/27 94/96 92/96
AY297924 Tomato leaf curl virus - 82/81 63/77 78/68 95/88 92/89 42/21 79/81 86/89
DQ852623 Tomato leaf curl virus - [Kerala II 2005] 79.5/78 39/47 79.5/69 84/80 86/87 41/23 88.5/89 73/71
EU862323 Tomato leaf curl virus 81/75 51/57 80/66 66/63 67/63 87/24 82/80 83/80
AJ496286 Cotton leaf curl Kokhran virus 85.5/82 83/55 83/71 90/85 85/85 62/32 94/95 91/96
AY765254 Cotton leaf curl Rajasthan virus 81/75 71/45 81/67 67/66 70/70 62/32 92/92 72/71
AM712436 Pedilanthus leaf curl virus 86/81 81/55 91/71 91/86 88/88 80/31 94/94 84/86
DQ116881 Pepper leaf curl virus 79.5/85 57/79 71.5/85 86.5/84 79/75 42/51 94.5/94 87/85
DQ989326 Papaya leaf curl virus 81/81 58/58 82.5/74 86.5/84 79/73 50,24 93/94 87/84
EU482411 Bhendi yellow vein mosaic virus 83/71 64/58 74/67 61/61 68/67 44/15 93/92 74/73
EF175733 Radish leaf curl virus 87/82 58/61 91/72 85/82 85/85 84/24 95/95 91/95
FJ487911 Euphorbia leaf curl virus- 83/81 55/71 92/74 91/83 86/83 48/27 91/91 75/78
AJ810157 Stachytarpheta leaf curl virus - [Hn34] 81/73 81/73 89/67 70/65 66/61 84/30 82/80 76/74
  1. Each column (IR, AC1-4, AV1, AV2) shows two values: first value is the percent identity of ToLCVK3/K5 (EU910140/EU910141) with other viruses, and the second value is the percent identity of ToLCV-CTM (DQ629102) with other viruses. The underlined values denote the highest values for any identity analysis