Table 1 Sequence identity between HAstV-6 (192-BJ07) and other HAstV genotypes
From: Complete genome sequence of human astrovirus genotype 6
Percent identity | ||||||||
|---|---|---|---|---|---|---|---|---|
5'NTR | ORF 1a | ORF 1b | ORF 2 | 3'NTR | ||||
Genotype (Genbank accession numbers) | Nucleotide | Nucleotide | Amino acid | Nucleotide | Amino acid | Nucleotide | Amino acid | Nucleotide |
HAstV-1 (L23513) | 76.5 | 79.3 | 87.1 | 86.4 | 94.8 | 71.3 | 71.4 | 98.8 |
HAstV-2 (L13745) | 42.7 | 79.4 | 87.3 | 86.0 | 94.2 | 69.9 | 67.5 | 95.1 |
HAstV-3 (AF141381) | 58.5 | 79.0 | 86.6 | 85.7 | 94.6 | 72.6 | 72.8 | 96.3 |
HAstV-4 (AY720891) | 76.8 | 79.9 | 87.0 | 86.5 | 95.1 | 62.4 | 65.6 | 92.6 |
HAstV-5 (DQ028633) | 57.3 | 79.2 | 86.5 | 87.5 | 94.6 | 72.1 | 74.8 | 96.3 |
HAstV-6 (Z46658) | NA | NA | NA | NA | NA | 96.3 | 95.9 | NA |
HAstV-7 (Y08632) | NA | NA | NA | NA | NA | 72.4 | 72.3 | NA |
HAstV-8 (AF260508) | 57.8 | 79.8 | 87.4 | 86.0 | 94.8 | 70.9 | 72.8 | 97.5 |