Table 1 Identification and genotype results of nineteen PCV2 isolates from different geographic distribution materials with clinical history in China.
From: Porcine circovirus type 2 (PCV2): genetic variation and newly emerging genotypes in China
Isolates name | Isolate region | Age(weeks) | Clinical history | Isolate tissue | Isolate time | Genotype | GenBank No | Genome length(nt) |
|---|---|---|---|---|---|---|---|---|
JF | Jilin | 6 | PMWS, respiratory signs | Inguinal lymph node | 2008 | PCV2b | HM038022 | 1767 |
SY | Jilin | 4 | PMWS, PNDS | Tonsil | 2008 | PCV2b | HM038028 | 1767 |
HN | Hunan | 9 | PMWS | Inguinal lymph node | 2006 | PCV2b | HM038021 | 1767 |
JS | Jiangsu | 6 | PMWS | Inguinal lymph node | 2005 | PCV2b | HM038024 | 1767 |
AS | Liaoning | 5 | PMWS | Serum | 2005 | PCV2b | HM038016 | 1767 |
SH | Shanghai | 7 | PMWS | Spleen | 2006 | PCV2b | HM038027 | 1767 |
WF | Shandong | 7 | PMWS, diarrhea | Serum | 2007 | PCV2b | HM038029 | 1767 |
CF | Neimenggu | 11 | PMWS | Inguinal lymph node | 2005 | PCV2b | HM038019 | 1767 |
MZL | Neimenggu | 6 | PMWS, respiratory signs | Spleen | 2008 | PCV2b | HM038025 | 1767 |
JMS | Heilongjiang | 7 | PMWS, respiratory signs | Tonsil | 2007 | PCV2b | HM038023 | 1767 |
QTH | Heilongjiang | 10 | PMWS, PNDS | kidney | 2007 | PCV2b | HM038026 | 1767 |
HL | Heilongjiang | 8 | PMWS | Inguinal lymph node | 2004 | PCV2b | HM038020 | 1767 |
YJ | Jilin | 3 | PMWS | Liver | 2008 | PCV2b | HM038032 | 1766 |
BY | Heilongjiang | 8 | PMWS | Tonsil | 2005 | PCV2b | HM038018 | 1767 |
BDH | Heilongjiang | 7 | PMWS, Abortion | Serum | 2008 | PCV2d | HM038017 | 1767 |
MDJ | Heilongjiang | 5 | PMWS, diarrhea | Inguinal lymph node | 2007 | PCV2d | HM038031 | 1766 |
AH | Anhui | 5 | PMWS | Serum | 2008 | PCV2d | HM038030 | 1766 |
CL | Jilin | 9 | PMWS, respiratory signs | lung | 2007 | PCV2a | HM038033 | 1768 |
LG | Jilin | 12 | PMWS | Inguinal lymph node | 2008 | PCV2a | HM038034 | 1768 |