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Table 2 Used primers and probe for the quantitative analysis and generation of genome fragments of PHoV.

From: High prevalence of porcine Hokovirus in German wild boar populations

Primer name

Orientation 5'-3'

PHoV_F

gTT ggT CCT ggT AAT CCT YTg g

PHoV_R

TCg TAC CgT TCA TCg Tgg Tg

HPV_R

TgC gTA CCg TTC ATC ATg ATg TT

PHoV_TM

FAM-Agg gAC CAg Tgg ATg ARg CAg C-BBQ

PHoV_240F

CAC ACC TAC CTC gCC TAT AAg AAT C

PHoV_1273F

ggT AYT TTg CWg CHT ggg C

PHoV_1408R

CAA TTC ACR CAR CCR TAA gAW ggA

PHoV_1847F

CCg ATC TCC CCg TCT gCC

PHoV_2293F

CCg CAC TgA ggg CTA Cg

PHoV_2492F

ggT AAg MAA WCA TgW CWg CYg C

PHoV_2492R

gCR gCW gWC ATg WTT KCT TAC C

PHoV_4115F

ggg ARA ATT ATg TTY TKC CTC ART ATg g

PHoV_4395R

ATC WAC MCC TgT CAT RAT MgC

PHoV_5288R

CAC TgA TCA gAA ggM ACY TCR TAC AC

  1. F: forward; R: reverse orientation; TM: TaqMan probe