From: Analysis of the 5'UTR of HCV genotype 3 grown in vitro in human B cells, T cells, and macrophages
Primer | Strand | Starting position | Ending position | Sequence (5' to 3') |
---|---|---|---|---|
9.1a | Positive | 24 | 42 | GAC ACT CCA CCA TRG ATC ACT C |
9.2a | Negative | 344 | 323 | CAT GWT GCA CGS TCT ACG AGA C |
10.1a | Positive | 48 | 71 | CTG TGA GGA ACT WCT GTC TTC ACG CRG |
10.2 | Negative | 310 | 293 | CAC TCG CAA GCA CCC TAT CAG |
9.1a-flap | Positive | 24 | 42 | AAT AAA TCA TAA GAC ACT CCA CCA TRG ATC ACT C |
9.2a-flap | Negative | 344 | 323 | AAT AAA TCA TAA CAT GWT GCA CGS TCT ACG AGA C |
8 up | Positive | 11 | 28 | CCC TGA TGG GGG CGA CAC TCC |
347 down | Negative | 345 | 325 | TGC TCA TGG TGC ACG GTC TAC GAG |
37 up | Positive | 41 | 66 | CAC TCC CCT GTG AGG AAC TAC TGT CTT CA |
318 down | Negative | 316 | 295 | CCG GGG CAC TCG CAA GCA CCC TAT C |