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Table 1 List of primers for this study.

From: Analysis of the 5'UTR of HCV genotype 3 grown in vitro in human B cells, T cells, and macrophages

Primer

Strand

Starting position

Ending position

Sequence (5' to 3')

9.1a

Positive

24

42

GAC ACT CCA CCA TRG ATC ACT C

9.2a

Negative

344

323

CAT GWT GCA CGS TCT ACG AGA C

10.1a

Positive

48

71

CTG TGA GGA ACT WCT GTC TTC ACG CRG

10.2

Negative

310

293

CAC TCG CAA GCA CCC TAT CAG

9.1a-flap

Positive

24

42

AAT AAA TCA TAA GAC ACT CCA CCA TRG ATC ACT C

9.2a-flap

Negative

344

323

AAT AAA TCA TAA CAT GWT GCA CGS TCT ACG AGA C

8 up

Positive

11

28

CCC TGA TGG GGG CGA CAC TCC

347 down

Negative

345

325

TGC TCA TGG TGC ACG GTC TAC GAG

37 up

Positive

41

66

CAC TCC CCT GTG AGG AAC TAC TGT CTT CA

318 down

Negative

316

295

CCG GGG CAC TCG CAA GCA CCC TAT C

  1. The starting and ending positions are relative to HCV H77 [26].