Figure 3

Identification of recombination event III. (A)BOOTSCAN evidence for the recombination origin on the basis of pairwise distance, modeled with a window size 200, step size 20, and 100 Bootstrap replicates; (B)Neighbor joining tree constructed using the recombinant region (2592-2941nt); (C)Neighbor joining tree constructed using the non-recombinant regions consisted of the rest of the genome. The green and red shadow boxes showed the parental isolates and the black shadow boxes showed the daughter isolate.