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Table 5 Primers/probes used in the study

From: A novel duplex real-time reverse transcriptase-polymerase chain reaction assay for the detection of hepatitis C viral RNA with armored RNA as internal control

Primer/probe

Primer/probe sequence (5'--3')

Position

As

5'-GAGTAGTGTTGGGTCGCGAA-3'

256--275

Aa

5'-GTGCACGGTCTACGAGACCTC-3'

320--340

Ap

FAM5'-CCTGATAGGGTGCTTGCGAGTGCC-3' BHQ

292--315

Bs

5'-AGCGTCTAGCCATGGCGTTAGTAT-3'

74--97

Ba

5'-TCCTCGCAATTCCGGTGTACTC-3'

161--182

Bp

FAM5'-CCCCCCTCCCGGGAGAGCCATAGT-3' BHQ

121--144

ICp

Cy55'-TTCCGCTGCCTGCTCAGTCGATCC-3' BHQ

 
  1. BHQ: Black Hole Quencher dye