Skip to main content

Table 4 Comparisons of the gene junctions of the IHNV genome with other Novirhabdoviruses

From: Molecular characterization of the virulent infectious hematopoietic necrosis virus (IHNV) strain 220-90

Type Species   Gene Junctions  
  N/P P/M M/G
IHNV UCU AUCUUUUUUU AC CGUGAUAUCACG UCUGUCUUUUUUU AC CGUGCGUUCACA UCUGUCUUUUUUU AC CGUGAAAACACG
SHRV UCUAUCUUUUUUU GC CGUGCUCUCACG UCUGUCUUUUUUU ACCGUGCUCUCACG UCUGUCUUUUUUU AC CGUGCUCUCACG
VHSV UCUAUCUUUUUUU GC CGUGCUAAUAUU UCUAUCUUUUUUU GC CGUGCUGACAAG UCUAUCUUUUUUU AC CGUGUAAACACA
HIRRV UCUAUCUUUUUUU AC CGUGCAAACACA UCUAUCUUUUUUU AC CGUGCAAUCACA UCUAUCUUUUUUU AC CGUGUAAACACA
  G/NV NV/L  
IHNV UCUGUCUUUUUUU GC CGUGUAAACACG UCUAUCUUUUUUU AC CGUGAAAACACG  
SHRV UCUGUCUUUUUUU U GC CGUGAUAUCACG UCUAUCUUUUUUU GC CGUGCAUUACACG  
VHSV UCUAUCUUUUUUU AC CGUGGAAAUACU UCUAUCUUUUUUU AC CGAGAAAACAAC  
HIRRV UCUAUCUUUUUUU GC CGUGUAUACAGA UCUAUCUUUUUUU AC CGUGAACACACG  
  1. The gene junctions shown here are negative-sense RNA sequences of respective viruses. IHNV, Infectious hematopoietic necrosis virus; SHRV, Snakehead rhabdovirus; VHSV, Viral hemorrhagic septicemia virus; HIRRV, Hirame rhabdovirus