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Table 1 Three groups of the C-terminus of LDAg from 43 HDV isolates based on the presence and location of clathrin box

From: The C-terminal sequence of the large hepatitis delta antigen is variable but retains the ability to bind clathrin

Clades

Isolate

Extra a.a. residues

Clathrin Box

HDV-1

Ethiopia

WDILFPSDPPFSPQS-CRPQ

LFP(A,S,V)D

group 1

 

US-1

WDILFPADPPSSPQS-CRPQ

 
 

US-2

WDILFPADPPFSPQS-CRPQ

 
 

Nagasaki-2

WDILFPVDPPFSPQS-CRPQ

 
 

Taiwan

WDLLFPADPPFSPQS-CRPQ

 
 

TW2667

WDILFPADPPFSPQS-CRPQ

 
 

China

WDILFPADPPFSPQS-CRPQ

 
 

Italy

WDILFPADPPFSPQS-CRPQ

 
 

Nauru

WDILFPSDPPFSPQS-CRPQ

 
 

Cagliari

WDLLFPADPPFSPQS-CRPQ

 
 

HDV-Iran

WDILFPSDPPFSPQS-CRPQ

 
 

Lebanon

WDILFPSDPPFSPQS-CRPQ

 
 

Somalia

WDILFPSDPPFSPQS-CRPQ

 

HDV-2

Japan

WVSPSPPQQRLPLLE-CTPQ

LPLLE

group 2

 

Taiwan-3

WVHPSPPQQRLPLLE-CTPQ

 
 

Miyako-37

WVRPSPPQQRLPLLE-CTPQ

 
 

TW2476

WVRPSPPQQRLPLLE-CTPQ

 
 

Yakut-26

WVNPVPPGQRLPLLE-CTPQ

 
 

Yakut-62

WVNPAPPGQRLPLLE-CTPQ

 

HDV-3

Peru-1

WYGFTPPPPGYYWVPGCTQQ

None

group 3

 

VnzD8624

WYGFTPPPPGYYWVPGCTQQ

 
 

VnzD8375

WYGFTPPPPGYYWVPGCTQQ

 
 

VnzD8349

WYGFTPPPPGYYWVPGCTQQ

 

HDV-4

Miyako

WVDPGRPSPRLPLLE-CTPQ

LPLLE

group 2

 

L215

WVGPGSPSPRFPLLE-CTPQ

 
 

Miyako-36

WVNPQPPPPRLPLLE-CTPQ

 
 

Taiwan-Tw-2b

WVSPQPPPPRLPLLE-CTPQ

 
 

AF209859

WVSPQPPPPRLPLLE-CTPQ

 
 

Tokyo

WVNPQPPPPRLPLLE-CTPQ

 

HDV-5

dFr2600

WVNPGPXPPRLPLLE-CTPQ

LPLLE

group 2

 

dFr2005

WVSPGSPSPRLPLLE-CTPQ

 
 

dFr47

WVNPGPRPPRLPLLE-CTPQ

 
 

dFr910

WVDPGPRPPRLPLLE-CTPQ

 
 

dFr73

WVSPGAPSPRLPLLE-CTPQ

 
 

dFr2703

WVSPXPXPPRLPLLE-CTPQ

 

HDV-6

dFr48

WGNTPPRPPRLPLLE-CTPQ

LPLLE

group 2

 

dFr2139

WGNGPPRSPRLPLLE-CTPQ

 
 

dFr2627

WGNTPPRPPRLPLLE-CTPQ

 

HDV-7

dFr45

WGNTPPRPPRLPLLE-CTPQ

LPLLE

group 2

 

dFr2158

WGPSPTPPPRLPLLE-CTPQ

 

HDV-8

dFr2072

WGQSPPPPPRLPLLE-CTPQ

LPLLE

group 2

 

dFr644

WGQRPPPPPRLPLLE-CTPQ

 
 

dFr2736

WGQQPPPPPRLPLLE-CTPQ

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