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Table 1 Nucleotide sequences of the oligonucleotides used for PCR amplification and sequencing

From: Molecular characterization and phylogenetic analysis of the complete genome of a porcine sapovirus from Chinese swine

Primer set

Primer name

Nucleotide sequence

Position

1

SP1F

GTGATCGGTGATGGCTAATTGCCG

1-14

 

SP1R

TGGAGATGGTATCTGTCAGTGTG

645-667

2

SP2F

GGCAGTACATTTGTGAGGGGTG

543-564

 

SP2R

CCTGTTCTGCTTTATCACCTCC

1170-1191

3

SP3F

GACGGTGGCTGCCATTAAAGCTG

1063-1085

 

SP3R

GCAGTGTAGCCGCGTACTGAGC

1833-1854

4

SP4F

ATTGACGTGACAGCCCCCAC

1733-1752

 

SP4R

TGTGGTTCTTGACTGGTGAG

2335-2354

5

SP5F

TGGTGGAGGCCTGTTCAGAGC

2223-2243

 

SP5R

CCAAGTTGTGGGCTGTCAACAC

2757-2778

6

SP6F

CAGAGTCCTCCTGGTGGACATTC

2680-2702

 

SP6R

ATTACCAAGCGCAACGCTAGGC

3340-3361

7

SP7F

CATGTGGCCAACATGTGTG

3243-3261

 

SP7R

TGATTTGGTCAAGGTAGCC

3873-3891

8

SP8F

CCTTCTACAACACCAAATGATTGCC

3768-3792

 

SP8R

AGGCCAGGATGTCAACACTGGCAC

4371-4394

9

SP9F

ATGTATGGATAGCCCTCAGATTG

4261-4283

 

SP9R

GTCCACATCAACGGCCGCCGGCTCG

4890-4914

10

SP10F

AGCCAACAGACACTCCTGTGTTCC

4760-4783

 

SP10R

CATGCCAGACCCTGATATTATCACC

5468-5492

11

SP11F

ACCTACACCAATGTCACCTGGAC

5328-5350

 

SP11R

GTGCCACACCTACTATGACCACAG

5890-5913

12

SP12F

TCAAGCCTCCAAACCAAGCC

5784-5803

 

SP12R

TGGCGGTCCATAAATGAGGTG

6395-6415

13

SP13F

TATGCAGCTTTGGCAATTCCC

6291-6311

 

SP13R

TTGATCTTTAGCAACTGTATCTG

6892-6915

14

SP14F

TTGGATTGCAGGAGCAATGCAGG

6777-6799

 

SP14R

TGTAAGGTTCGGTACGCGTAACC

7280-7303

15

SP15F1

TCAATTGGCTGGGTCACGTGAAG

7027-7049

 

SP15F2

CAAACACCTTTGGTCCACCAAGG

7070-7092