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Table 3 LNA-based detection of HCMV genotypic variants of glycoprotein B and UL33 GPCR

From: High genotypic diversity and a novel variant of human cytomegalovirus revealed by combined UL33/UL55 genotyping with broad-range PCR

 

gBCLS types (gBp1 PCR)

UL33 types (CMV-UL33 PCR)

Specimen number

without LNA

with LNA

without LNA

with LNA

S1§

2

3, 5#

3

4

S2

2

3

3

-

S3

5

-

1

4

S4

4

1

3

-

S5

1

-

4

-

S6

1

2

2

-

S7

1

-

2

-

S8

3

-

2

-

S9

1

3

2

-

S10

3

-

2

-

S11

3

1

2

-

S12

3

-

1

5

S13

1

-

1

-

S14

3

-

4

-

S15

3

-

4

-

S16

3

-

1

-

S17

1

-

2

-

S18

1

-

4

-

S19

3

-

4

-

S20

1

3

1

4

S21

1

-

2

-

S22

4

3

1

-

S23

1

-

1

-

S24

3

-

1

-

S25

1

-

2

-

S26

1

-

2

-

S27

1

-

2

-

S28

3

4

1

4

C1

1

 

2

 

C2

3

 

2

 

C3

3

 

1

 

C4

1

 

1

 

C5

2

 

5

 
  1. # Genotype 5 was detected after addition of two LNAs (LNA-HCMV-gB-2 and LNA-HCMV-gB-3)
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Virology Journal

ISSN: 1743-422X