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Table 3 Previously published F gene sequences of class II Newcastle disease virus used for phylogenetic analysis.

From: Phylogenetic analysis of Newcastle disease viruses isolated from waterfowl in the Upper Midwest Region of the United States

GenBank

accession

number

Strain name

Fusion

cleavage

site

Genotype

Country

AY175726

AV 963/98 NZ5/97 (GNZDK98025)

GGKQGRL

I

Ireland

AY562991

Chicken/N. Ireland/Ulster/67

GGKQGRL

I

Ireland

DQ439947

NDV05-095

GGKQGRL

I

China

EF564821

Mallard/US(MD)/04-204/2004

GGKQGRL

I

USA

EF564901

Mallard/US(MD)/04-235/2004

GGKQGRL

I

USA

EF564942

Mallard/US(MD)/04-483/2004

GGKQGRL

I

USA

AY130861

Chicken/U.S.(PA)/31003/92

GGKQGRL

I

USA

AF217084

Queensland V4

GGKQGRL

I

Australia

AY175736

AV 80/97 D813-2 (HTWDK95193)

GGKQGRL

Ia

USA

AY427817

Heb02

GGKQGRL

Ia

China

AY935489

01-1108

GRRQGRL

Ia

Australia

AY289000

Chicken/USA/Roakin/48

GRRQKRF

II

USA

AY845400

LaSota

GGRQGRL

II

China

M24695

BI/47

GGRQGRL

II

USA

AY727881

32C/T.98

GGKQGRL

IIa

Argentina

EF564834

Blue winged teal/US(LA)/87-155/1987

GGKQGRL

IIa

USA

EF564836

Blue winged teal/US(LA)/87-190/1987

GGKQGRL

IIa

USA

EF564841

Blue winged teal/US(LA)/87-247_b/1987

GGKQGRL

IIa

USA

EF564972

Mallard/US(MD)/03-152/2003

GEKQGRL

IIa

USA

EF564993

Mallard/US(MD)/03-807/2003

GEKQGRL

IIa

USA

EF565012

Mallard/US(MD)/01-618/2001

GEKQGRL

IIa

USA

EF565019

Mallard/US(MN)/98-350/1998

GEKQGRL

IIa

USA

EF565032

Mallard/US(MN)/99-397/1999

GEKQGRL

IIa

USA

EU547752

KR/duck/02/06

GGKQGRL

II

Korea

EU547755

KR/duck/05/07

GGKQGRL

II

Korea

EU547757

KR/duck/07/07

GGKQGRL

II

Korea

M24700

AUS/32

GRRQKRF

III

Australia

AY741404

Herts/33

GRRQRRF

IV

USA

AY288999

Chicken/Mexico/37821/96

GRRQKRF

V

Mexico

AY562987

Gamefowl/U.S.(CA)/211472/02

GRRQKRF

V

USA

AY288996

Pigeon/Italy/1166/00

GRRQKRF

VI

Italy

AF358786

TW/2000

GRRQKRF

VII

Taiwan

AF456442

JS/5/01/Go

GRRQKRF

VII

China

AF048763

AF2240

GRRQKRF

VIII

Malaysia

AY734534

Chicken/Trenque Lauquen

GRRQKRF

VIII

Argentina

AF456435

JS/1/97/Go

GRRQKRF

IX

China