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Table 2 Previously published F gene sequences of class I Newcastle disease virus used for phylogenetic analysis.

From: Phylogenetic analysis of Newcastle disease viruses isolated from waterfowl in the Upper Midwest Region of the United States

GenBank

accession

number

Strain name

Fusion

cleavage

site

Genotype

Country

EF565077

Blue winged teal/US(LA)/88-304/1988

GERQERL

1

USA

EF565074

Green winged teal/US(LA)/88-35/1988

GERQERL

1

USA

EF565014

Chicken/US(NY)/13828/1995

GERQERL

1

USA

EF564958

Mallard/US(MD)/02-224/2002

GERQERL

2

USA

EF565017

Mallard/US(MN)/98-49/1998

GERQERL

2

USA

EF564962

Wood duck/US(OH)/02-677/2002

GERQERL

2

USA

EF564955

Mallard/US(MD)/02-195/2002

GERQERL

2

USA

EU547751

KR/duck/01/06

GERQERL

2

Korea

EF027144

Poultry/Hong Kong/1252.8/2005

GERQERL

3

Hong Kong

EF027142

Chicken/Hong Kong/1250.2/2005

GERQERL

3

Hong Kong

EF564960

Mallard/US(MD)/02-308/2002

GERQERL

4

USA

EF564966

Mallard/US(MD)/02-868/2002

GERQERL

4

USA

EF564994

Black duck/US(MD)/01-431/2001

GERQERL

5

USA

EF565023

Mallard/US(MN)/00-470/2000

GERQERL

5

USA

EF565079

Mallard/US(MN)/99-348/1999

GERQERL

5

USA

EF565065

Environment/US(NJ)/378106-4/2005

GERQERL

6

USA

EF565035

Mallard/US(MN)/00-66/2000

GERQERL

7

USA

EF564895

Mallard/US(MD)/04-118/2004

GERQERL

7

USA

EF564892

Ruddy turnstone/US(DE)/1485/2002

GERQERL

8

USA

EF565031

Blue winged teal/US(TX)/02-40/2002

GERQERL

9

USA

EF565022

Mallard/US(MN)/00-185/2000

GERQERL

9

USA