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Table 1 Selected siRNA Targets

From: Inhibition of Monkeypox virus replication by RNA interference

MPV ORF

VACV ORF

Gene size(bp)

Region

Known or predicted function

A5L

A4L

846

113340-114185

39 kDa immunodominant virion core protein needed for the progression of IV to infectious IMV

A6R

A5R

486

114223-114708

Precursor of RNA polymerase 22 kDa

C14L

F8L

195

35828-36022

No information available

C2L

K2L

1128

26384-27511

Serine protease inhibitor-like, SPI-3; inhibition

of the ability of infected cells to fuse

C3L

K3L

132

27672-27803

Interferon resistance; host defense modulator

E8L

D8L

915

103116-104030

IMV cell attachment, putative; blockage causes plaque reduction

F8L

E9L

3021

53691-56711

DNA polymerase, catalytic subunit

H1L

H1L

516

87256-87771

Tyrosine/serine protein phosphatase; blocks IFN-γ

H3L

H3L

975

88358-89332

IMV cell attachment; heparin binding surface protein involved in IMV maturation

I3L

I3L

810

61085-61894

Virosomal ssDNA-binding phosphoprotein; interacts with R2 subunit of ribonucleotide reductase

L5L

J5L

402

82891-83292

Essential for virus multiplication

P1L

N1L

354

22056-22409

Virokine; host defense modulator

  1. Selected MPV gene targets for siRNA development with gene size, location across MPV genome, and known or predicted function of its orthologs in VACV.