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Table 1 Oligonucleotides used for cloning and sequencing of the VHSV genome

From: Molecular characterization of the Great Lakes viral hemorrhagic septicemia virus (VHSV) isolate from USA

VHSV primers

Sequences

Position

VHSV 1F

GTATCATAAAATATGATGAGT

1-21

VHSV 1R

CAACTTGAACTTCTTCATGGC

2028-2008

VHSV 2F

AAGAAGACCGACAACATACTCT

1858-1879

VHSV 2R

GACGAAACTTTGAGAGGAGAAA

3993-3972

VHSV 3F

ATCTCATTACCAACATGGCTCAAA

3892-3915

VHSV 3R

TTGTTCGCTTCTCCCCTAATTGT

5932-5910

VHSV 4F

TGCCATAGACCTACTCAAGTTAT

5814-5835

VHSV 4R

CTGATCCATGGTGGCTATGTGAT

8042-8020

VHSV 5F

AGATGATTGTCTCCACCATGAA

7846-7867

VHSV 5R

GAGATCCGCTCTCGTTCATCAA

10027-10006

VHSV 6F

GACAAGAAAGCTGGGAAGAGA

9787-9807

VHSV 6R

GTATAGAAAATAATACATACCA

11183-11162

VHSV 850R

ACAGTCCAATCATGGTCATTC

851-831

VHSV 1MF

GGACAAAATGATCAAGTACATC

595-616

VHSV 2MF

CCATTCTCTGTGAAGATCAACAT

2456-2478

VHSV 3MF

TGTGAGACAGAAAGATGACGAT

4566-4587

VHSV 4MF

GACACCACCGAGAAGAGACTAC

6429-6450

VHSV 5MF

GAAGAGAAGGAAGCACACCAA

8424-8444

VHSV 5'End1

GTGGCATCCGTCTTTCTCAA

10599-10618

VHSV 5'End2

CGCTCATCACTCTCCTCGAA

10660-10679

Oligo (dT)

GCGGCCGCTTTTTTTTTTTTTTTTTTTTT

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