Table 1 Korean orf virus sequence and published parapoxvirus sequences used in the phylogenetic analysis
From: Phylogenetic analysis and characterization of Korean orf virus from dairy goats: case report
Published Sequences | |||||
|---|---|---|---|---|---|
Description | Country of origin | Species of origin | Reference | Region of gene | Accession Number |
ORF/2009-B2L | Korea | Goat | NAa | B2L | GQ328006 |
ORF/2009-VIR | Korea | Goat | NA | VIR | GQ328007 |
Orf-sh | USA | Sheep | Guo et al. (2004) | B2L | AY424970 |
Orf-ta | USA | Takin | Guo et al. (2004) | B2L | AY424971 |
Orf-mu | USA | Musk ox | Guo et al. (2004) | B2L | AY424969 |
Orf-va1 | USA | Goat | Guo et al. (2003) | B2L | AY278209 |
Orf-ca1 | USA | Goat | Guo et al. (2003) | B2L | AY278208 |
Orf-ca2 | USA | Sheep | Guo et al. (2003) | B2L, VIR | DQ184476 |
NZ-2-1 | New Zealand | Sheep | [13]Sullivan et al. (1994) | B2L | U06671 |
OV-IA82 | USA | Sheep | [14]Delhon et al. (2004) | B2L | AY386263 |
Taiping | Taiwan | Goat | Chan et al. (2009) | B2L | EU327506 |
OV-SA00 | USA | Sheep | Delhon et al. (2004) | B2L, VIR | AY386264 |
India 59/05 | India | Goat | Hosamani et al. (2006) | B2L | DQ263304 |
Nantou | Taiwan | Goat | Chan et al. (2007) | B2L | DQ904351 |
Hoping | Taiwan | Goat | NA | B2L | EU935106 |
India 67/04 | India | Sheep | Hosamani et al. (2006) | B2L | DQ263305 |
India 79/04 | India | Sheep | Hosamani et al. (2006) | B2L | DQ263306 |
PCPV-TQ | NA | Cow | Guo et al. (2004) | B2L | AY424972 |
BPSV-RS | NA | Calf | Guo et al. (2004) | B2L | AY424973 |
BPSV-BV | USA | Calf | Delhon et al. (2004) | B2L, VIR | AY386265 |
1010/03 GR | Greece | Sheep | Kottaridi et al. (2006) | VIR | DQ275162 |
30/96GR | Greece | Goat | Kottaridi et al. (2006) | VIR | DQ275161 |
176/95GR | Greece | Sheep | Kottaridi et al. (2006) | VIR | DQ275165 |
928/02GR | Greece | Sheep | Kottaridi et al. (2006) | VIR | DQ275168 |
661/95IT | Italy | Sheep | Kottaridi et al. (2006) | VIR | DQ275169 |
12129/00IT | Italy | Sheep | Kottaridi et al (2006) | VIR | DQ275170 |
6126/02IT | Italy | Sheep | Kottaridi et al. (2006) | VIR | DQ275173 |
Orf-va2 | USA | NA | Guo et al. (2004) | VIR | AY278210 |
1710/03GR | Greece | Goat | Kottaridi et al. (2006) | VIR | DQ275166 |
Orf-11-1 | New Zealand | Sheep | McInnes et al. (1998) | VIR | AJ222702 |
Orf-11-2 | New Zealand | Sheep | NA | VIR | AY292459 |
NZ-2-2 | New Zealand | Sheep | [15]Mercer et al. (2006) | VIR | DQ184476 |
NZ-2-2 | New Zealand | Sheep | [16]McInnes et al. (1998) | VIR | AF053969 |
MRI-Scab | New Zealand | Sheep | McInnes et al. (1998) | VIR | AJ222701 |
Orf-ta | USA | Takin | Guo et al. (2004) | VIR | AY424976 |
Orf-mu | USA | Ox musk | Guo et al. (2004) | VIR | AY424974 |
Orf-sh | USA | Sheep | Guo et al. (2004) | VIR | AY424975 |
155/95GR | Greece | Sheep | Kottaridi et al. (2006) | VIR | DQ275163 |
759/01GR | Greece | Goat | Kottaridi et al. (2006) | VIR | DQ275164 |
7389/03IT | Italy | Sheep | Kottaridi et al. (2006) | VIR | DQ275172 |
13598/03IT | Italy | Sheep | Kottaridi et al. (2006) | VIR | DQ275171 |
513/03GR | Greece | Goat | Kottaridi et al. (2006) | VIR | DQ275167 |
Hoping | Taiwan | Goat | NA | VIR | EU935104 |
Natou | Taiwan | Goat | [17]Chan et al. (2007) | VIR | EU327507 |
Taiping | Taiwan | Goat | Chan et al. (2007) | VIR | EU327508 |
GPDV | Taiwan | NA | Guo et al. (2003) | VIR | AF380126 |