Figure 3

Gag p17/p24 junction amino acid alignment. Amino acid sequences of Patient A - D was aligned and compared with NCBI CRF01_AE reference sequence (Accession number: AF197340) and the highest homology matched sequence detected in Yunnan China in 2002 (Accession number: EF062020). Dots indicate identical amino acid residue. Boxed regions indicate cluster-specific amino acid alterations (frequency = 100%) with respect to AF197340 and EF062020.