From: Diversification of West Nile virus in a subtropical region
 | Forward Primer | Reverse Primer |
---|---|---|
Envelope 1st (1042–1857) | 5'-GAAGGCGATAGTTGTGTGACCA-3' (1042–1063) | 5'-TGTTCCCTTCAGCTGCAACTT-3' (1834–1854) |
Envelope 2nd (1632–2459) | 5'-CCTTGGAGCAGTGCTGGAAGTA-3' (1636–1657) | 5'-TTCACGGAGAGGAAGAGCAGAA-3' (2438–2459) |
NS3 1st (5085–5908) | 5'-CGGCTCATACATAAGCGCGAT-3' (5085–5105) | 5'-TTGGTTTCACACTCTTCCGGC-3' (5888–5908) |
NS3 2nd (5514–6318) | 5'-TTCCACAAAGGTCGAGCTAGG-3' (5514–5534) | 5'-CCTAGGACCATCAAAGCACCA-3' (6298–6318) |
NS3 3rd (5950–6726) | 5'-CCATCTGCAGTGACAGCAGCTA-3' (5950–5971) | 5'-TTCGTTCCTGGAACTTCAGCC-3' (6756–6776) |