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Table 17 The predicted HLA Class 1 CTL epitopes in HIV-1 Vpr

From: A comprehensive analysis of the naturally occurring polymorphisms in HIV-1 Vpr: Potential impact on CTL epitopes

Location of the predicted epitope Amino acid sequence HLA allele
7 – 15 DQGPQREPY B62
8 – 16 QGPQREPYN Dd
11 – 19 QREPYNEWM B_2705
14 – 22 PYNEWMLDL A24, Kd
18 – 26 WMLDLLEDL A_0201, A_0205, B_2705, B_3901, Db_revised, Kd
26 – 34 LKHEAVRHF Cattle_A20
31 – 39 VRHFPRPWL B_2705
34 – 42 FPRPWLHEL B7, Cw_0401
38 – 46 WLHELGQQI A_0201
39 – 47 LHELGQQIY B_3801
49 – 57 TYGDTWEGV Kd
60 – 68 IVRTLQQLL B7
61 – 69 VRTLQQLLF B_2702, B_2705
64 – 72 LQQLLFVHF B62, B_2705, B_3902
65 – 73 QQLLFVHFR A_3101, B_2705, Cattle_A20
66 – 74 QLLFVHFRI A_0201
72 – 80 FRIGCQHSR B_2705, Cattle_A20
79 – 87 SRIGIIRGR B_2705, Cattle_A20
87 – 95 RRGRNGSGR B_2705, Cattle_A20