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Table 6 Co-mutating pairs and their position with respect to MEME motifs.

From: Correlating novel variable and conserved motifs in the Hemagglutinin protein with significant biological functions

Co-mutating
pairs
MEME Motif MEME Motif Co-mutating
pairs
MEME Motif MEME Motif
  (position 1) (position 2)   (position 1) (position 2)
I-78-D-18 9 2 Q-205-I-78 2 9
T-99-I-78 1 9 Q-205-T-99 2 1
G-140-D-18 7 2 Q-205-P-159 2 7
G-140-I-78 7 9 Q-205-T-171 2 11
G-151-G-140 7 7 Q-205-T-176 2 11
N-153-D-18 7 2 S-209-T-99 13 1
N-153-I-78 7 9 S-209-Q-205 13 2
P-159-D-18 7 2 V-212-N-153 13 7
P-159-I-78 7 9 V-212-Q-205 13 2
P-159-T-99 7 1 V-260-D-18 6 2
P-159-G-140 7 7 V-260-T-99 6 1
P-159-N-153 7 7 V-260-G-140 6 7
G-160-D-18 7 2 V-260-N-153 6 7
G-160-I-78 7 9 V-260-P-159 6 7
N-161-D-18 7 2 V-260-G-160 6 7
N-161-I-78 7 9 V-260-N-161 6 7
N-161-G-140 7 7 V-260-Q-205 6 2
N-161-N-153 7 7 N-264-D-18 6 2
N-161-P-159 7 7 N-264-T-99 6 1
T-171-A-14 11 2 N-264-N-153 6 7
T-171-T-99 11 1 N-264-P-159 6 7
T-171-P-159 11 7 N-264-N-161 6 7
K-172-N-153 11 7 N-264-Q-205 6 2
K-172-P-159 11 7 I-294-D-18 - 2
K-172-N-161 11 7 I-294-T-99 - 1
G-174-D-18 11 2 I-294-N-153 - 7
G-174-G-140 11 7 I-294-P-159 - 7
G-174-N-153 11 7 I-294-N-161 - 7
G-174-P-159 11 7 I-363-N-153 1 7
G-174-G-160 11 7 I-363-N-161 1 7
G-174-N-161 11 7 I-363-G-174 1 11
T-176-D-18 11 2 I-363-V-212 1 13
T-176-T-99 11 1 I-363-I-294 1 -
T-176-G-140 11 7 V-400-D-18 9 2
T-176-N-153 11 7 V-400-G-140 9 7
T-176-P-159 11 7 V-400-N-153 9 7
T-176-G-160 11 7 V-400-P-159 9 7
T-176-N-161 11 7 V-400-G-160 9 7
    V-400-N-161 9 7
  1. 77 co-mutating pairs implicated in MEME blocks 1, 2, 3, and 7 were determined using CRASP (see materials and methods) and aligned with MEME motifs.