From: Comparative analysis of full genomic sequences among different genotypes of dengue virus type 3
Geno | V | V | I | I | I | I | II | II | II | II | II | III | III | III | III |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Strain* | H87 | 80-2 | Ind88 | Ind04 | TW95 | Ind98 | Tha94 | Sing95 | Tw182 | Tw358 | Tw368 | TW99 | Martini | SriLan | Brazil |
Year | 56' | 80' | 88' | 04' | 94' | 98' | 94' | 95' | 98' | 98' | 98' | 99' | 99' | 00' | 02' |
Capsid | |||||||||||||||
35** | R | Â | Â | Â | Â | Â | Â | Â | Â | K | K | K | K | K | K |
65 | V | Â | I | I | Â | I | Â | Â | Â | Â | Â | Â | Â | Â | Â |
82 | K | Â | R | R | R | R | Â | Â | Â | Â | Â | Â | Â | Â | Â |
97 | K | Â | R | R | R | R | Â | Â | Â | Â | Â | Â | Â | Q | Â |
108 | M | Â | Â | Â | Â | Â | Â | I | Â | Â | Â | I | I | I | I |
112 | T | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | A | A | A | A |
prM | |||||||||||||||
55 | H | Â | L | L | L | L | L | L | L | L | L | Â | Â | Â | Â |
57 | T | Â | Â | Â | Â | Â | A | A | A | A | A | Â | Â | Â | Â |
128 | L | Â | F | F | F | F | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Envelope | |||||||||||||||
68 | I | Â | V | V | V | V | V | Â | Â | Â | Â | Â | Â | Â | Â |
81 | I | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | V | V | V | V |
124 | S | Â | Â | L | Â | L | P | P | P | P | P | P | P | P | P |
132 | H | Â | Â | Â | Â | Â | Â | Â | Â | Y | Y | Y | Y | Y | Y |
154 | E | Â | Â | Â | Â | Â | D | D | D | D | D | Â | Â | Â | Â |
160 | A | Â | Â | Â | Â | Â | V | V | V | V | V | Â | Â | Â | Â |
169 | A | Â | Â | V | V | V | Â | V | V | V | V | H | T | T | T |
231 | R | Â | Â | K | K | K | Â | Â | Â | Â | Â | Â | Â | Â | Â |
270 | T | Â | Â | Â | Â | Â | N | N | N | N | N | N | N | N | N |
301 | L | Â | Â | S | Â | S | Â | Â | Â | Â | Â | T | T | T | T |
303 | T | Â | A | A | A | A | Â | Â | Â | Â | Â | Â | Â | Â | Â |
383 | K | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | N | N | N | Â |
452 | I | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | V | V | V | V |
479 | A | Â | Â | V | V | V | V | Â | Â | V | V | Â | Â | Â | Â |
NS1 | |||||||||||||||
178 | L | Â | Â | Â | Â | Â | S | S | S | S | S | Â | Â | Â | Â |
188 | V | Â | Â | Â | Â | Â | I | I | I | I | I | Â | Â | Â | Â |
217 | L | Â | Â | Â | Â | Â | F | F | F | F | F | Â | Â | Â | Â |
339 | N | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | S | S | S | S |
NS2A | |||||||||||||||
37 | L | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | F | F | F | F |
55 | H | Â | R | R | Â | R | Â | Â | Â | Â | Â | Â | Â | Â | Â |
133 | A | Â | Â | Â | Â | Â | T | T | T | T | T | Â | Â | Â | Â |
153 | T | Â | M | M | M | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
175 | I | Â | Â | Â | Â | Â | V | V | V | V | V | V | V | V | V |
NS3 | |||||||||||||||
115 | I | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | T | T | T | T |
255 | R | Â | K | K | K | K | Â | Â | Â | Â | Â | Â | Â | Â | Â |
324 | D | Â | Â | Â | Â | Â | E | E | E | E | E | Â | Â | Â | Â |
350 | E | Â | D | D | Â | D | Â | Â | Â | Â | Â | Â | Â | Â | Â |
356 | V | Â | A | A | Â | A | Â | Â | Â | Â | Â | A | A | A | A |
452 | V | Â | Â | Â | Â | Â | A | A | A | A | A | A | A | A | A |
589 | K | Â | Â | Â | Â | Â | R | R | R | R | R | R | Â | Â | Â |
NS4A | |||||||||||||||
89 | I | Â | V | V | V | V | Â | Â | Â | Â | Â | Â | Â | Â | Â |
99 | D | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | E | E | E | E |
148 | V | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | I | I | I | I |
115 | V | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | I | I | I | I |
190 | L | Â | F | F | F | F | Â | Â | Â | Â | Â | Â | Â | Â | Â |
NS4B | |||||||||||||||
116 | V | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | I | I | I | I |
191 | L | Â | F | F | F | F | Â | Â | Â | Â | Â | Â | Â | Â | Â |
NS5 | |||||||||||||||
281 | K | Â | Â | R | R | R | Â | Â | Â | Â | Â | Â | Â | Â | Â |
288 | S | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | N | N | N | N |
336 | M | Â | T | T | T | T | Â | Â | Â | Â | Â | Â | Â | Â | Â |
422 | R | Â | Â | K | Â | Â | Â | Â | Â | Â | Â | K | K | K | K |
585 | K | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | T | T | T | T |
619 | I | Â | Â | Â | Â | Â | V | V | V | V | V | V | Â | V | Â |
749 | R | Â | K | K | K | K | K | K | K | K | K | Â | Â | Â | Â |
835 | D | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | N | N | N | N |
876 | N | Â | Â | Â | Â | Â | D | D | D | D | D | Â | Â | Â | Â |