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Table 2 Percentage identity within the entire genome of seven different DENV-3 obtained from Taiwan, as compared with the prototype strain H87.

From: Comparative analysis of full genomic sequences among different genotypes of dengue virus type 3

  

pairwise nucleotide identity (%)

 

Strain

1

2

3

4

5

6

7

8

1

H87

-

95.1

95.0

95.0

95.0

95.3

94.9

95.0

2

98TW182

95.0

-

98.0

98.0

98.0

94.2

94.1

98.0

3

98TW358

95.0

98.0

-

99.9

99.9

94.0

94.2

99.9

4

98TW364

95.0

98.0

100.0

-

99.9

94.0

94.2

99.9

5

98TW368

95.0

97.9

99.9

99.9

-

94.0

94.2

99.9

6

95TW466

95.3

94.0

93.8

93.8

93.8

-

93.9

94.0

7

99TW628

94.8

93.9

94.0

94.0

94.0

93.8

-

94.2

8

98TWmosq

94.9

97.9

99.9

99.9

99.9

93.8

94.0

-

  

pairwise amino acid identity (%)

  1. The upper-right matrix corresponds to nucleotide sequences and the lower-left matrix to the amino acid sequences.