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Table 1 Nucleotide and amino acid identity with reference strains, by virus protein

From: Identification of a contemporary human parechovirus type 1 by VIDISCA and characterisation of its full genome

Nucleotide Identity (amino acid identity)
Region HPeV1a HPeV2b HPeV3c HPeV3d HPeV4e HPeV4f HPeV5g HPeV5h HPeV6i HPeV6j
5'UTR 86.6 84.9 84.9 85.2 88.9 90.8 ND* ND 88.3 ND
VP0 82.6 (94.1) 75.7 (84.1) 70.6 (73.4) 71.0 (73.4) 72.9 (78.9) 72.9 (79.2) 72.3 (79.2) 72.3 (79.2) 72.7 (78.9) 72.3 (79.2)
VP3 76.9 (89.3) 72.8 (82.2) 68.1 (76.3) 67.9 (76.7) 71.7 (79.8) 70.2 (80.2) 68.9 (76.7) 68.5 (77.1) 73.1 (83.4) 72.1 (83.8)
VP1 76.6 (89.6) 71.1 (79.2) 64.2 (70.6) 64.6 (71.0) 70.7 (74.0) 71.7 (77.1) 69.6 (74.0) 65.7 (71.4) 69.7 (74.9) 69.3 (74.9)
2A 76.7 (89.3) 77.1 (87.3) 87.1 (88.0) 88.7 (87.3) 76.2 (89.3) 88.2 (94.7) 79.1 (88.7) 76.2 (88.7) 79.8 (88.7) 78.2 (88.7)
2B 82.2 (96.7) 78.4 (95.9) 91.5 (100.0) 91.0 (100.0) 83.1 (100.0) 85.2 (100.0) 83.9 (98.4) 83.3 (98.4) 82.0 (97.5) 82.8 (98.4)
2C 79.4 (92.7) 77.4 (86.6) 92.8 (99.1) 92.0 (98.8) 82.1 (97.3) 88.1 (98.2) 81.8 (95.1) 79.3 (93.9) 78.6 (91.8) 80.1 (96.4)
3A 75.8 (87.2) 76.9 (83.8) 91.2 (91.5) 92.6 (94.0) 81.8 (93.2) 83.2 (92.3) 80.1 (81.2) 77.5 (88.9) 78.6 (88.0) 80.3 (91.5)
3B 71.7 (90.0) 70.0 (90.0) 86.7 (85.0) 86.7 (90.0) 78.3 (95.0) 73.3 (85.0) 80.0 (90.0) 66.7 (90.0) 78.3 (90.0) 76.7 (90.0)
3C 81.0 (97.0) 81.7 (97.0) 91.0 (98.0) 91.3 (98.5) 86.8 (98.0) 87.0 (97.5) 79.5 (99.0) 80.5 (96.0) 84.2 (98.0) 81.3 (97.0)
3D 82.8 (95.9) 82.9 (94.2) 91.0 (97.0) 90.8 (97.0) 88.7 (97.0) 87.9 (97.7) 82.3 (95.1) 82.4 (93.8) 83.9 (95.7) 82.3 (95.3)
3'UTR 83.3 87.9 94.5 92.3 89.0 94.5 84.6 89.0 83.5 84.6
  1. Strain designations: aHarris,bWilliamson,cA308/99,dCan82853-01,eT75-4077,fK251176-02,gCT86-6760, hT92-15, iNII561-2000, jBNI-67, *ND = not determined.