Table 1 Percent (%) nucleotide identity of Ark DPI non-structural genes and ORF1ab, ORF2-6 and complete genome with other IBV strainsa, b, c
IBV Strains | 5'UTR | PLpro | Mpro | RdRp | ORF1 | ORF2-6 | Complete genome |
|---|---|---|---|---|---|---|---|
Ark99 | 98 | 87 | 99 | 99 | NA | 96 | NA |
A2 | 95 | 83 | 85 | 99 | 86 | 85 | 86 |
Beaudette | 96 | 85 | 93 | 93 | 91 | 91 | 91 |
BJ | 96 | 83 | 88 | 93 | 86 | 85 | 86 |
Cal99* | 100 | 99 | 97 | 99 | 96 | 94 | 96 |
CK/CH/LSD/05I | 97 | 84 | 88 | 90 | 89 | 90 | 89 |
Connecticut | 97 | 87 | 100 | 99 | NA | 96 | NA |
CU-T2* | 100 | 94 | 99 | 99 | NA | 94 | NA |
DE072 | 100 | 100 | 90 | 90 | NA | NA | NA |
Florida | 97 | 87 | 100 | 99 | NA | NA | NA |
GA98* | 100 | 100 | 100 | 100 | NA | NA | NA |
Gray | 100 | 87 | 100 | 100 | NA | NA | NA |
Jilin | NA | NA | NA | NA | NA | 100 | NA |
LX4 | 94 | 83 | 85 | 89 | 87 | 84 | 86 |
M41 | 97 | 87 | 91 | 94 | 91 | 91 | 91 |
SAIBK | 92 | 85 | 90 | 90 | 90 | 86 | 89 |