From: Occult hepatitis B infection: an evolutionary scenario
Donor splice sites | |||||
---|---|---|---|---|---|
 | pos 5'->3' | phase | strand | confidence | 5' exon intron 3' |
1 | 459 | 1 | + | 0.83 | GACTGTCAAG^GTATGTTGCC |
2 | 2448 | 0 | + | 0.31 | GAATCTCAAT^GTTAGTATTC |
3 | 2472 | 0 | + | 0.75 | GACTCATAAG^GTGGGGAACT |
4 | 2986 | 0 | + | 0.99 | CGCCAACAAG^GTAGGAGCTG |
Acceptor splice sites | |||||
 | pos 5'->3' | phase | strand | confidence | 5' intron exon 3' |
1 | 202 | 1 | + | 0.57 | CGTGTTACAG^GCGGGGTTTT |
2 | 488 | 2 | + | 0.93 | CTAATTTCAG^GATCCTCAAC |
3 | 504 | 0 | + | 0.07 | CAACCACCAG^CACGGGACCC |
4 | 707 | 2 | + | 0.17 | TGGTTCGCAG^GGCTTTCCCC |
5 | 734 | 2 | + | 0.26 | TGGCTTTCAG^TTATATGGAC |
6 | 1304 | 2 | + | 0.25 | TTGCTCGCAG^CAGGTCTGGA |
7 | 1307 | 2 | + | 0.28 | CTCGCAGCAG^GTCTGGAGCA |
8 | 1384 | 1 | + | 0.26 | TGGCTGCTAG^GCTGTGCTGC |
9 | 1979 | 1 | + | 0.82 | TTTCCTTCAG^TACGAGATCT |
10 | 1985 | 1 | + | 0.14 | TCAGTACGAG^ATCTTCTAGA |
11 | 2335 | 2 | + | 0.18 | ACTTCCGGAG^GTTGCTGTTG |
12 | 2349 | 1 | + | 0.31 | CTGTTGTTAG^AGGACGAGGC |
13 | 2351 | 0 | + | 0.19 | GTTGTTAGAG^GACGAGGCAG |
14 | 2357 | 0 | + | 0.19 | AGAGGACGAG^GCAGGTCCCC |
15 | 2361 | 1 | + | 0.19 | GACGAGGCAG^GTCCCCTAGA |
16 | 2370 | 1 | + | 0.19 | GGTCCCCTAG^AAGAAGAACT |
17 | 2373 | 1 | + | 0.19 | CCCCTAGAAG^AAGAACTCCC |
18 | 2376 | 1 | + | 0.19 | CTAGAAGAAG^AACTCCCTCG |
19 | 2394 | 1 | + | 0.37 | CGCCTCGCAG^ACGAAGGTCT |
20 | 2838 | 0 | + | 0.07 | TGGGAACAAG^ATCTACAGCA |
21 | 2846 | 2 | + | 0.18 | AGATCTACAG^CATGGGGCAG |
22 | 2856 | 0 | + | 0.19 | CATGGGGCAG^AATCTATCCA |
23 | 2870 | 2 | + | 0.19 | TATCCACCAG^CAATCCTCTG |
24 | 2901 | 0 | + | 0.18 | CGACCACCAG^TTGGATCCAG |
25 | 2911 | 1 | + | 0.07 | TTGGATCCAG^CCTTCAGAGC |