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Table 3 Sequences of the 5' NC region of the mutated NS-, PB2- and M-like vRNA templates

From: Non coding extremities of the seven influenza virus type C vRNA segments: effect on transcription and replication by the type C and type A polymerase complexes

Segments and mutants

sequences

NS

AGCAGGAGCAAGGGGUUUUUUAACUUUGGAAUAACAACUUAAAACAAUUA

NS/5'6U

AGCAGU AGCAAGGGGUUUUUUAACUUUGGAAUAACAACUUAAAACAAUUA

NS/16A(5U)

AGCAGGAGCAAGGGGA UUUUU AACUUUGGAAUAACAACUUAAAACAAUUA

NS/16A(6U)

AGCAGGAGCAAGGGGA UUUUUUAACUUUGGAAUAACAACUUAAAACAAUUA

PB2

AGCAGUAGCAAGAGGAUUUUUA

PB2/6U

AGCAGUAGCAAGAGGAU UUUUUA

PB2/85

AGCAGUAGCAAGAGGAUUUUUA GUUAGACAUCUUUAUCUUUUUCACAUUCUUAUUUACAUCGCUUGAUGCA

GCCCUUUGUGAGGC UUA

PB2/34

AGCAGUAGCAAGAGGAUUUUUA GUUAGACAUCUU UUA

PB2/29

AGCAGUAGCAAGAGGAUUUUUA GUUAGAC UUA

PB2/29 mu

AGCAGUAGCAAGAGGAUUUUUA GCAAGAC CUA

PB2/24

AGCAGUAGCAAGAGGAUUUUUA GU UUA

PB2/24 mu

AGCAGUAGCAAGAGGAUUUUUA CG CUA

M

AGCAGUAGCAAGGGGAUUUUUUCAAGGUAAUUA

M/stop mu

AGCAGUAGCAAGGGGAUUUUUUCAAGGUAAC UA

M/5Ustop mu

AGCAGUAGCAAGGGGAUUUUU CAAGGUAAC UA

M/5Umustop mu

AGCAGUAGCAAGGGGAUUUUU CAAGGC AAC UA

  1. In bold, stop codons. Underlined, introduced mutations or deletions.
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Virology Journal

ISSN: 1743-422X