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Table 2 Distribution of mutations by genomic region.

From: Experimental observations of rapid Maize streak virus evolution reveal a strand-specific nucleotide substitution bias

Genomic region

Mutations in region

(region size)

Mutations in rest of genome

(region size)

Fold difference in sub/site

 

Χ2 p-value

MSV-Kom/Set – parental viruses

mp + cp

4

(1039)

3

(1658)

2.1

 

0.534 †

repA + repB

1

(1159)

6

(1538)

0.2

 

0.250 †

MSV-Kom/Set – chimaeras

mp + cp

7

(1039)

1

(1658)

11.2

 

0.014 † *

repA + repB

1

(1159)

7

(1538)

0.2

 

0.164 †

MSV-Tas

       

mp + cp

22

(1039)

29

(1644)

1.20

 

0.617 †

repA + repB

20

(1159)

31

(1524)

0.85

 

0.671 †

  1. † Yates' chi-squared p-values; * p-value < 0.05.
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Virology Journal

ISSN: 1743-422X