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Table 4 Compilation of consensus sequences of the RdRp for the Picornavirales Honeybee viruses sequenced to date for the domains identified by Koonin & Dolja [17].

From: The use of RNA-dependent RNA polymerase for the taxonomic assignment of Picorna-like viruses (order Picornavirales) infecting Apis mellifera L. populations

Virus Family/Genus Domain I Domain II Domain III Domain IV Domain V Domain VI Domain VII Domain VIII
KBV Dicistroviridae DTLKDERRPIE K VF SNGPMDFSIAFRMY YLGFIAHLMENR I GTNVYSQDWSK G DFSTFDGSLN THSQP SGNPATTPLNCFINSMGLRMCFSI LVSY GDDNVI QDVQY LK RK P L CMDTILEM
ABPV Dicistroviridae DTLKDERRPIE K VF SNGPMDFSITFRMY YLGFIAHLMENR I GTNVYSQDWHK G DFSTFDGSLN THSQP SGNPATTPLNCFINSMGLRMVFEL IVSY GDDNVI EDVQY LK RK P L SMDTILEM
IAPV Dicistroviridae DTLKDERRPIE K VF SNGPMDFSIAFRMY YLGFIAHLMENR I GTNVYSGDWSK G DFSTFDGSLN THSQP SGNPATTPLNCFINSMGLRMCFAI MVSY GDDNVI KDVQY LK RK P L CMDTILEM
BQCV Dicistroviridae DTLKDERKPKHK MF SNGPIDYLVWSKMYFNPIVAVLSELK VGSNVYSTDWDV G DFEGFDASEQ CKSLP SGHYLTAIINSVFVNLVMCLVFME IVAY GDDHVV EDVSY LK RN P L SLDVVLEM
SBV Iflavirus DTLKDERKLPE K VFCNPPIDYIVSMRQY YMHFVAAFMEQR VGINVQSTEWTL I DYSNFGPGFN KCGSP SGAPITVVINTLVNILYIFVAWET LFCY GDD LIM LNSTF LK HG A L AWSSINDT
DWV Iflavirus DCLKDTCLPVE K IF SISPVQFTIPFRQY YLDFMASYRAAR I GIDVNSLEWTN G DYKNFGPGLD PCGIP SGSPITDILNTISNCLLIRLAWLG LVCY GDDLIM QTATF LK HG N L DKVSVEGT
VDV Iflavirus DCLKDTCLPVE K IF SISPVQFTIPFRQY YLDFMASYRAAR I GIDVNSLEWTN G DYKNFGPGLD PCGIP SGSPITDILNTISNCLLIRLAWQG LVCY GDDLIM QTATF LK HG N L DKVSIEGT
KV Iflavirus DCLKDTCLPVE K IF SISPVQFTIPFRQY YLDFMASYRAAR I GIDVNSLEWTN G DYKNFGPGLD PCGIP SGSPITDILNTISNCLLIRLAWLG LVCY GDDLIM QTATF LK HG N L DKVSVEGT
CBPV Unassigned      EGTRCSGDPHTSIGNGFINAFIIWLCLRK SAHE GDD GIV   
  1. Bold type and underline type indicating 100 and > 75% amino acid conservation for domains I-IV, VII-VIII respectively.
  2. Bold type and underline type indicating 100 and > 77.8% amino acid conservation for domains I-IV & VII-VIII respectively.