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Table 1 Candidate regions selected by BxB for primer design

From: Universal primers for HBV genome DNA amplification across subtypes: a case study for designing more effective viral primers

Candidate Regions*

Sequence

ORF located in

8~26

ACCTCTGCCTAATCATCTC

X/preC

40~68

ACTGTTCAAGCCTCCAAGCTGTGCCTTGG

preC

591~616

GCCGCGTCGCAGAAGATCTCAATCTC

Terminal Protein

993~1018

GGGTCACCATATTCTTGGGAACAAGA

Terminal Protein

1450~1469

CCTGCTGGTGGCTCCAGTTC

pre-S2

1571~1592

TCCTAGGACCCCTGCTCGTGTT

S

1657~1679

ACTTCTCTCAATTTTCTAGGGGG

S

2131~2159

TATATGGATGATGTGGTATTGGGGGCCAA

S

2491~2516

TTCTCGCCAACTTACAAGGCCTTTCT

RT

3199~3221

CACCAGCACCATGCAACTTTTT

X/preC

  1. *Here we select "CTTTTTC" of X ORF as the start point