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Table 1 Structural alignment of the β-barrel fold

From: Structural comparisons of the nucleoprotein from three negative strand RNA virus families

RMSD (Ã…) P-value Aligned residues

HRV16-VP2 (252 residues)

SBMV C-sub (222 residues)

STMV (147 residues)

HPV (233 residues≠)

HRV16-VP1 (285 residues)

3.06

1.57e-3

145

3.02

1.63e-3

149

3.50

1.63e-1

108

3.56

1.16e-1

111

  1. ≠In the L1 capsid protein of HPV, three large loops and the C-terminal extension were removed to isolate the β-barrel fold for the alignment.
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Virology Journal

ISSN: 1743-422X